Experiment summary for ENCSR000AQI

  • Status: released

Summary

Assay
ChIP-seq
Target
RBBP5
Biosample summary
Homo sapiens K562
Biosample Type
immortalized cell line
Replication type
isogenic
Description
ChIP-seq on human K562 RBBP5
Nucleic acid type
DNA
Library starting quantity
27.8ng [3-1]
Size range
200-600 [3-1]
Lysis method
see document [1-1]see document [2-1]
Extraction method
see document [1-1]see document [2-1]
Fragmentation method
see document [1-1]see document [2-1]sonication (generic) [3-1]
Size selection method
see document [1-1]see document [2-1]
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE2 project
Lab
Bradley Bernstein, Broad
Award
U54HG004570 (Bradley Bernstein, Broad)
Project
ENCODE
Aliases
bradley-bernstein:Project Element 1019
Date released
March 6, 2012
Submitter comment
As of February 28, 2017, new mapping and peak calling is required due to duplicated files.
Tags
ENCYCLOPEDIAv4 tag

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleAntibodyLibrary
11K562 immortalized cell lineENCBS639AAAENCAB000AKHENCLB695AVM
21K562 immortalized cell lineENCBS639AAAENCAB000AKHENCLB695AVN
31K562 immortalized cell lineENCBS979ZKWENCAB000AKHENCLB726HVR