Experiment summary for ENCSR000AQF
doi:10.17989/ENCSR000AQF
Alternate accession: ENCSR941WOT
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- HDAC1
- Biosample summary
- Homo sapiens K562
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- ChIP-seq on human K562 HDAC1
- Nucleic acid type
- DNA
- Library starting quantity
- 74.36ng
- Size range
- 200-600
- Fragmentation methods
- see document [2-1]see document [1-1]sonication (generic) [3-1]
- Controls
Attribution
ENCODE2 project
- Lab
- Bradley Bernstein, Broad
- Award
- U54HG004570 (Bradley Bernstein, Broad)
- Project
- ENCODE
- External resources
- References
- Aliases
- bradley-bernstein:Project Element 1015
- Date submitted
- March 6, 2012
- Date released
- March 6, 2012
- Annotation (gkmsvm-model)
- Submitter comment
- As of February 28, 2017, new mapping and peak calling is required due to duplicated files.
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 2 | 1 | Homo sapiens K562 cell line | ENCBS674MPN | ENCAB649LYF | ENCLB695ATK |
| 1 | 1 | Homo sapiens K562 cell line | ENCBS674MPN | ENCAB649LYF | ENCLB695ATJ |
| 3 | 1 | Homo sapiens K562 cell line | ENCBS979ZKW | ENCAB649LYF | ENCLB487VHT |