Experiment summary for ENCSR000AHD

doi:10.17989/ENCSR000AHD

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens MCF-7
Biosample Type
cell line
Replication type
isogenic
Description
HAIB ChIP CTCF in MCF-7
Nucleic acid type
DNA
Size range
100-300
Fragmentation methods
sonication (Bioruptor Twin)
Size selection method
SPRI beads AMPURE
Controls

Attribution

ENCODE2 project
Lab
Richard Myers, HAIB
Award
U54HG004576 (Richard Myers, HAIB)
Project
ENCODE
Date submitted
January 23, 2012
Date released
September 10, 2012
Annotation (gkmsvm-model)
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv4Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag ENCYCLOPEDIAv5Search for all Experiment with internal tag ccre_inputv1

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens MCF-7 cell lineENCBS000AAAENCAB000AFRENCLB305ZZZ
21Homo sapiens MCF-7 cell lineENCBS001AAAENCAB000AFRENCLB306ZZZ