Experiment summary for ENCSR000AHD

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens MCF-7
Biosample Type
cell line
Replication type
isogenic
Description
HAIB ChIP CTCF in MCF-7
Nucleic acid type
DNA
Size range
100-300
Lysis method
see document
Extraction method
see document
Fragmentation methods
sonication (Bioruptor Twin)
Size selection method
SPRI beads AMPURE
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE2 project
Lab
Richard Myers, HAIB
Award
U54HG004576 (Richard Myers, HAIB)
Project
ENCODE
Date submitted
January 23, 2012
Date released
September 10, 2012
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5Search for all Experiment with internal tag ccre_inputv1Search for all Experiment with internal tag ENCYCLOPEDIAv4

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11MCF-7 cell lineENCBS000AAAENCAB000AFRENCLB305ZZZ
21MCF-7 cell lineENCBS001AAAENCAB000AFRENCLB306ZZZ