Summary for ENCSR507JGJ
doi:10.17989/ENCSR507JGJ
Summary
- Status
- released
- Description
- Reference epigenome for human OCI-LY7 cell line
- Donor diversity
- single
- Assay
- ChIP-seq, RNA-seq, small RNA-seq, whole-genome shotgun bisulfite sequencing, microRNA-seq, DNase-seq
- Target
- H3K4me1, H3K27ac, H3K36me3, H3K9me3, H3K27me3, H3K4me3, CTCF
- Biosample summary
- Homo sapiens OCI-LY7
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- ENCODE Consortium
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- External resources
Experiments in ENCSR507JGJ
Experiments
12 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|
| ENCSR999CXD | whole-genome shotgun bisulfite sequencing | Homo sapiens OCI-LY7 | Richard Myers, HAIB | released | ||
| ENCSR027HML | ChIP-seq | CTCF | Homo sapiens OCI-LY7 | Bradley Bernstein, Broad | released | |
| ENCSR447ZGY | ChIP-seq | H3K27ac | Homo sapiens OCI-LY7 | Bradley Bernstein, Broad | released | |
| ENCSR243AIS | ChIP-seq | H3K36me3 | Homo sapiens OCI-LY7 | Bradley Bernstein, Broad | released | |
| ENCSR060WGK | ChIP-seq | H3K4me1 | Homo sapiens OCI-LY7 | Bradley Bernstein, Broad | released | |
| ENCSR005SXO | ChIP-seq | H3K4me3 | Homo sapiens OCI-LY7 | Bradley Bernstein, Broad | released | |
| ENCSR389WWC | ChIP-seq | H3K9me3 | Homo sapiens OCI-LY7 | Bradley Bernstein, Broad | released | |
| ENCSR752KQT | ChIP-seq | H3K27me3 | Homo sapiens OCI-LY7 | Bradley Bernstein, Broad | archived | |
| ENCSR001HHK | RNA-seq | Homo sapiens OCI-LY7 | Thomas Gingeras, CSHL | released | ||
| ENCSR489NAM | DNase-seq | Homo sapiens OCI-LY7 | John Stamatoyannopoulos, UW | released | ||
| ENCSR740DKM | small RNA-seq | Homo sapiens OCI-LY7 | Thomas Gingeras, CSHL | released | ||
| ENCSR596ZXX | microRNA-seq | Homo sapiens OCI-LY7 | Ali Mortazavi, UCI | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR063AUO | input library | Homo sapiens OCI-LY7 | Bradley Bernstein, Broad | released |