Experiment summary for ENCSR740DKM

doi:10.17989/ENCSR740DKM

Summary

Status
released
Assay
small RNA-seq
Biosample summary
Homo sapiens OCI-LY7
Biosample Type
cell line
Replication type
isogenic
Description
The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Treatments
Tobacco Acid Pyrophosphatase for 1 hour
Nucleic acid type
RNA
Depleted in
rRNA
Size range
<200
Fragmentation methods
see document
Strand specificity
Strand-specific (forward)

Attribution

ENCODE3 project
Lab
Thomas Gingeras, CSHL
Award
U54HG007004 (Thomas Gingeras, CSHL)
Project
ENCODE
External resources
Date submitted
October 7, 2014
Date released
November 20, 2014
Reference Epigenome
ENCSR507JGJ 
Annotation (physical modeling)
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
21Homo sapiens OCI-LY7 cell lineENCBS866AAAENCLB188SKA
11Homo sapiens OCI-LY7 cell lineENCBS865AAAENCLB206AWW