Summary for ENCSR081OCI
doi:10.17989/ENCSR081OCI
Summary
- Status
- released
- Donor diversity
- single
- Assay
- ChIP-seq
- Target
- CTCF
- Biosample summary
- HCT116 cell line treated with 5-Phenyl-1H-indole-3-acetic acid genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, genetically modified (insertion) using CRISPR targeting H. sapiens BRD4
- Diseases
- Not reported
- Treatments
- 5-Phenyl-1H-indole-3-acetic acid
Attribution
ENCODE4 project
- Lab
- ENCODE Consortium
- Award
- U24HG009397 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- Aliases
- encode:TF-ChIP_BRD4-tag
- External resources
- None submitted
- Tags
Experiments in ENCSR081OCI
Experiments
2 experiments
Accession | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|
| ENCSR450DXU | Homo sapiens HCT116 genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, (insertion) using CRISPR targeting H. sapiens BRD4 treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours | Bradley Bernstein, Broad | released | |
| ENCSR385CDF | Homo sapiens HCT116 genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, (insertion) using CRISPR targeting H. sapiens BRD4 | Bradley Bernstein, Broad | released |
Control experiments
2 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR661KFD | input library | Homo sapiens HCT116 genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, (insertion) using CRISPR targeting H. sapiens BRD4 treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours | Bradley Bernstein, Broad | released | |
| ENCSR317ZOF | input library | Homo sapiens HCT116 genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, (insertion) using CRISPR targeting H. sapiens BRD4 | Bradley Bernstein, Broad | released |