Summary for ENCSR393VDD
Summary
- Status
- released
- Description
- Functional characterization series for the gene target NMU.
- Donor diversity
- single
- Assay
- Flow-FISH CRISPR screen
- Biosample summary
- Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr4:55237572-56068533
- Diseases
- Not reported
- Treatments
- doxycycline
- Elements references
- ENCSR733BIG (GRCh38 chr4:55237572-56068533)
- Tiling modality
- full tiling
Attribution
ENCODE4 project
- Lab
- Pardis Sabeti, Broad
- Award
- UM1HG009435 (Pardis Sabeti, Broad)
- Project
- ENCODE
- Aliases
- pardis-sabeti:NMU_series_NMU
- External resources
- None submitted
Experiments in ENCSR393VDD
Experiments
2 experiments
Accession | Assay | Examined loci | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|
| ENCSR640NMZ | Flow-FISH CRISPR screen | NMU (90-100%) | Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr4:55237572-56068533 | Pardis Sabeti, Broad | released | |
| ENCSR867VWP | Flow-FISH CRISPR screen | NMU (0-10%) | Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr4:55237572-56068533 | Pardis Sabeti, Broad | released |
Control experiments
2 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR111BOI | control | Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr4:55237572-56068533 | Pardis Sabeti, Broad | released | |
| ENCSR631QFN | control | Pardis Sabeti, Broad | released |