Functional Characterization Experiment summary for ENCSR925GGJ
doi:10.17989/ENCSR925GGJ
Summary
- Status
- released
- Assay
- CRISPR screen (Control CRISPR screen)
- Control type
- control
- Biosample summary
- Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chrX:48397929-49657009
- Biosample Type
- cell line
- Perturbation type
- CRISPRi
- Tiling modality
- peak tiling
- Replication type
- isogenic
- Nucleic acid type
- DNA
- Platform
- Illumina MiSeq
- Elements references
- ENCSR645TEA (GRCh38 chrX:48397929-49657009)
- Elements cloning
- ENCSR449TVF
Attribution
ENCODE4 project
- Lab
- Pardis Sabeti, Broad
- Award
- UM1HG009435 (Pardis Sabeti, Broad)
- Project
- ENCODE
- Aliases
- pardis-sabeti:GATA_US_control_exp
- Date submitted
- March 7, 2020
- Date released
- May 20, 2021
- Functional Characterization Series
- ENCSR009KPS , ENCSR917XEU
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens K562 cell line genetically modified (insertion) using transduction, genetically modified using CRISPRi (sgRNA) | ENCBS444KIW | ENCGM097HOE, ENCGM470LXQ | ENCLB416PSU |
| 2 | 1 | Homo sapiens K562 cell line genetically modified (insertion) using transduction, genetically modified using CRISPRi (sgRNA) | ENCBS140ZOP | ENCGM097HOE, ENCGM470LXQ | ENCLB444UWS |