Functional Characterization Experiment summary for ENCSR429DUU
doi:10.17989/ENCSR429DUU
Summary
- Status
- released
- Assay
- CRISPR screen (Control CRISPR screen)
- Control type
- control
- Biosample summary
- Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr11:61555996-61664628
- Biosample Type
- cell line
- Perturbation type
- CRISPRi
- Tiling modality
- full tiling
- Replication type
- isogenic
- Nucleic acid type
- DNA
- Platform
- Illumina MiSeq
- Elements references
- ENCSR353ROW (GRCh38 chr11:61555996-61664628)
- Elements cloning
- ENCSR674ATB
Attribution
ENCODE4 project
- Lab
- Pardis Sabeti, Broad
- Award
- UM1HG009435 (Pardis Sabeti, Broad)
- Project
- ENCODE
- Aliases
- pardis-sabeti:FADS_US_control_exp
- Date submitted
- March 5, 2020
- Date released
- May 20, 2021
- Functional Characterization Series
- ENCSR382ZJS , ENCSR968CIN , ENCSR630WLB , ENCSR278YTB
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens K562 cell line genetically modified (insertion) using transduction, genetically modified using CRISPRi (sgRNA) | ENCBS544VCC | ENCGM097HOE, ENCGM470LXQ | ENCLB434KAE |
| 2 | 1 | Homo sapiens K562 cell line genetically modified (insertion) using transduction, genetically modified using CRISPRi (sgRNA) | ENCBS956JVV | ENCGM097HOE, ENCGM470LXQ | ENCLB889XOG |