Functional Characterization Experiment summary for ENCSR393DOW

Summary

Status
released
Assay
CRISPR screen (Control CRISPR screen)
Control type
control
Biosample summary
Homo sapiens HCT116 genetically modified using transduction, CRISPR
Biosample Type
cell line
Replication type
isogenic
Description
Growth-based CRISPR screen targeting genomic regions near MYC and MYB genes.
Nucleic acid type
RNA
Size range
710-720
Controls
Elements references

Attribution

ENCODE4 project
Lab
Bing Ren, UCSD
Award
UM1HG009402 (Yin Shen, UCSF)
Project
ENCODE
Aliases
bing-ren:BC19E_D0_HCT116
Date submitted
January 31, 2020
Date released
August 6, 2020

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Library
11HCT116 cell line genetically modified (insertion) using transduction, genetically modified (interference) using CRISPRENCBS457RFOENCGM554RTS, ENCGM353IMQENCLB558RBU
21HCT116 cell line genetically modified (insertion) using transduction, genetically modified (interference) using CRISPRENCBS061VIUENCGM554RTS, ENCGM353IMQENCLB022KRZ