Experiment summary for ENCSR985KAT
doi:10.17989/ENCSR985KAT
Summary
- Status
- released
- Assay
- polyA plus RNA-seq
- Biosample summary
- Homo sapiens HepG2
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- RNA Evaluation HepG2 Long Poly-A+ from Graveley
- Nucleic acid type
- polyadenylated mRNA
- RNA integrity number
- 9.5 [2-1]9.4 [1-1]
- Size range
- >200
- Extraction method
- Trizol
- Fragmentation methods
- chemical (Illumina TruSeq)
- Size selection method
- SPRI beads
- Strand specificity
- Strand-specific (reverse)
- Spike-ins datasets
- ENCSR449DXG
- Platform
- Illumina HiSeq 2000, Illumina MiSeq
Attribution
ENCODE3 project
- Lab
- Brenton Graveley, UConn
- Award
- U54HG007005 (Brenton Graveley, UConn)
- Project
- ENCODE
- External resources
- Aliases
- brenton-graveley:HepG2-LZ
- Date submitted
- June 17, 2014
- Date released
- June 30, 2014
- Reference Epigenome
- ENCSR888GEN
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 2 | 1 | Homo sapiens HepG2 cell line | ENCBS883DWI | ENCLB256SCK |
| 1 | 1 | Homo sapiens HepG2 cell line | ENCBS574ZRE | ENCLB257SKY |