Experiment summary for ENCSR938LSP
doi:10.17989/ENCSR938LSP
Summary
- Status
- released
- Assay
- RNA-seq (total RNA-seq)
- Biosample summary
- Homo sapiens GM23338 originated from GM23248
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- The libraries contained in this experiment come from independent growths of cell line GM23338, an induced pluripotent stem cell (iPSC) line derived from cell line GM23248. They are stranded PE101 Illumina Hi-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.
- Nucleic acid type
- RNA
- Depleted in
- rRNA
- Size range
- >200
- Fragmentation methods
- shearing (Covaris generic)
- Size selection method
- other
- Strand specificity
- Strand-specific (reverse)
- Spike-ins datasets
- ENCSR156CIL
- Platform
- Illumina HiSeq 2000
Attribution
ENCODE3 project
- Lab
- Thomas Gingeras, CSHL
- Award
- U54HG007004 (Thomas Gingeras, CSHL)
- Project
- ENCODE
- External resources
- References
- Date submitted
- June 18, 2014
- Date released
- June 30, 2014
- Reference Epigenome
- ENCSR769ZAH
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens GM23338 cell line originated from GM23248 | ENCBS368AAA | ENCLB984FOR |
| 2 | 1 | Homo sapiens GM23338 cell line originated from GM23248 | ENCBS373AAA | ENCLB779JPG |