Experiment summary for ENCSR911ZMB
doi:10.17989/ENCSR911ZMB
Summary
- Status
- released
- Assay
- ChIA-PET
- Target
- CTCF
- Biosample summary
- Homo sapiens A549
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- CTCF ChIA-PET in A549
- Nucleic acid type
- DNA
- Size range
- 300-600
- Extraction method
- SDS
- Fragmentation methods
- sonication (Branson Sonifier 250)
- Size selection method
- BluePippin
- Platform
- Illumina MiSeq, Illumina HiSeq 4000
- Controls
Attribution
ENCODE4 project
- Lab
- Yijun Ruan, JAX
- Award
- UM1HG009409 (Yijun Ruan, JAX)
- Project
- ENCODE
- External resources
- References
- Aliases
- yijun-ruan:A549_CTCF
- Date submitted
- October 29, 2019
- Date released
- January 25, 2021
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens A549 cell line | ENCBS085MQM | ENCAB635SXP | ENCLB227SBJ |
| 2 | 1 | Homo sapiens A549 cell line | ENCBS744PGM | ENCAB635SXP | ENCLB427HJM |