Experiment summary for ENCSR783OQM
doi:10.17989/ENCSR783OQM
Summary
- Status
- released
- Assay
- siRNA knockdown followed by RNA-seq (siRNA RNA-seq)
- Control type
- non-specific target
- Biosample summary
- Homo sapiens MCF-7 expressing RNAi
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- RNA-seq on CB-24 cells treated with siRNA targeting a non-specific control siRNA.
- Nucleic acid type
- RNA
- Size range
- >200
- Strand specificity
- Strand-specific (reverse)
- Platform
- Illumina HiSeq 4000
Attribution
ENCODE3 project
- Lab
- Michael Snyder, Stanford
- Award
- U54HG006996 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Aliases
- peggy-farnham:E-MCF-7-siRNA-control
- Date submitted
- June 30, 2017
- Date released
- July 27, 2017
- Gene Silencing Series
- ENCSR838YHE
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 3 | 1 | Homo sapiens MCF-7 cell line expressing RNAi | ENCBS778AGF | ENCGM752AFW | ENCLB184NGW |
| 2 | 1 | Homo sapiens MCF-7 cell line expressing RNAi | ENCBS312USZ | ENCGM752AFW | ENCLB471URE |
| 1 | 1 | Homo sapiens MCF-7 cell line expressing RNAi | ENCBS963BLD | ENCGM752AFW | ENCLB966XXD |