Experiment summary for ENCSR718AXQ
doi:10.17989/ENCSR718AXQ
Summary
- Status
- released
- Assay
- small RNA-seq
- Biosample summary
- Homo sapiens Peyer's patch tissue female adult (53 years)
- Biosample Type
- tissue
- Replication type
- unreplicated
- Description
- The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
- Treatments
- Tobacco Acid Pyrophosphatase for 1 hour
- Nucleic acid type
- RNA
- RNA integrity number
- 3.4
- Depleted in
- rRNA
- Size range
- <200
- Fragmentation methods
- see document
- Strand specificity
- Strand-specific (forward)
- Platform
- Illumina NextSeq 500
Attribution
ENCODE3 project
- Lab
- Thomas Gingeras, CSHL
- Award
- U54HG007004 (Thomas Gingeras, CSHL)
- Project
- ENCODE
- External resources
- References
- Date submitted
- June 28, 2016
- Date released
- August 5, 2016
- Reference Epigenome
- ENCSR934NIX
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
---|---|---|---|---|
1 | 1 | Homo sapiens female adult (53 years) Peyer's patch tissue | ENCBS231DCI | ENCLB123FNE |