Experiment summary for ENCSR540ONK
doi:10.17989/ENCSR540ONK
Alternate accession: ENCSR467KKO
Summary
- Status
- released
- Assay
- whole-genome shotgun bisulfite sequencing (WGBS)
- Biosample summary
- Homo sapiens neuronal stem cell originated from H1
- Biosample Type
- in vitro differentiated cells
- Replication type
- isogenic
- Nucleic acid type
- DNA
- Library starting quantity
- 5000ng
- Extraction method
- QIAGEN DNeasy Blood & Tissue Kit
- Platform
- Illumina Genome Analyzer II
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Joe Ecker, Salk
- Award
- U01ES017166 (Bing Ren, UCSD)
- Project
- Roadmap
- External resources
- Aliases
- roadmap-epigenomics:Whole genome shotgun bisulfite sequencing of the H1 cell line differentiated into neural progenitor cells_Feb-06-2011_73755, roadmap-epigenomics:Whole genome shotgun bisulfite sequencing of the H1 cell line differentiated into neural progenitor cells_Feb-06-2011_82305, roadmap-epigenomics:Whole genome shotgun bisulfite sequencing of the H1 cell line differentiated into neural progenitor cells_Feb-06-2011_34980, roadmap-epigenomics:Whole genome shotgun bisulfite sequencing of the H1 cell line differentiated into neural progenitor cells_Feb-06-2011_23829, roadmap-epigenomics:Whole genome shotgun bisulfite sequencing of the H1 cell line differentiated into neural progenitor cells_Feb-06-2011_93791
- Date submitted
- July 31, 2013
- Date released
- July 31, 2013
- Reference Epigenome
- ENCSR539JGB
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens male embryo neuronal stem in vitro differentiated cells originated from H1 | ENCBS248XVJ | ENCLB336ZJG |
| 1 | 16 | Homo sapiens male embryo neuronal stem in vitro differentiated cells originated from H1 | ENCBS248XVJ | ENCLB147ZPT |
| 1 | 9 | Homo sapiens male embryo neuronal stem in vitro differentiated cells originated from H1 | ENCBS248XVJ | ENCLB062QSV |
| 2 | 1 | Homo sapiens male embryo neuronal stem in vitro differentiated cells originated from H1 | ENCBS870NBB | ENCLB224GNX |
| 2 | 5 | Homo sapiens male embryo neuronal stem in vitro differentiated cells originated from H1 | ENCBS870NBB | ENCLB079XXO |