Experiment summary for ENCSR538ZXG

doi:10.17989/ENCSR538ZXG

Summary

Status
archived
Assay
RIP-seq
Target
SUZ12
Biosample summary
Homo sapiens K562
Biosample Type
cell line
Replication type
isogenic
Nucleic acid type
RNA
Size range
150-150
Fragmentation methods
sonication (generic) [1-1]sonication (generic) [1-2]sonication (generic) [3-2]sonication (generic) [2-2]sonication (generic) [2-1]sonication (generic) [3-1]none [4-1]none [4-2]none [6-1]none [5-1]none [5-2]none [6-2]sonication (generic) [9-1]sonication (generic) [7-1]sonication (generic) [8-1]
Strand specificity
unstranded
Controls

Attribution

ENCODE3 project
Lab
John Rinn, Broad
Award
U54HG006991 (Bradley Bernstein, Broad)
Project
ENCODE
Aliases
bradley-bernstein:Project Element 1905
Date submitted
July 7, 2016
Date released
May 4, 2016

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens K562 cell lineENCBS354VJMENCAB500STAENCLB473XRD
12Homo sapiens K562 cell lineENCBS354VJMENCAB696YGRENCLB429WUK
32Homo sapiens K562 cell lineENCBS378DFUENCAB696YGRENCLB329YEM
22Homo sapiens K562 cell lineENCBS005AIZENCAB696YGRENCLB281FKM
21Homo sapiens K562 cell lineENCBS005AIZENCAB500STAENCLB734QBG
31Homo sapiens K562 cell lineENCBS378DFUENCAB500STAENCLB672LKB
41Homo sapiens K562 cell lineENCBS947YKGENCAB392FIIENCLB429TMF
42Homo sapiens K562 cell lineENCBS947YKGENCAB333HSGENCLB893TRF
61Homo sapiens K562 cell lineENCBS083ACTENCAB333HSGENCLB284KWN
51Homo sapiens K562 cell lineENCBS729ELFENCAB333HSGENCLB508INC
52Homo sapiens K562 cell lineENCBS729ELFENCAB392FIIENCLB812KON
62Homo sapiens K562 cell lineENCBS083ACTENCAB392FIIENCLB619SXY
91Homo sapiens K562 cell lineENCBS216WMIENCAB000BEBENCLB843XVI
71Homo sapiens K562 cell lineENCBS532KVAENCAB000BEBENCLB585CJG
81Homo sapiens K562 cell lineENCBS323WRWENCAB000BEBENCLB072WQB