Experiment summary for ENCSR538ZXG

Summary

Status
archived
Assay
RIP-seq
Target
SUZ12
Biosample summary
Homo sapiens K562
Biosample Type
cell line
Replication type
isogenic
Nucleic acid type
RNA
Size range
150-150
Fragmentation method
sonication (generic) [1-1]sonication (generic) [1-2]sonication (generic) [3-2]sonication (generic) [2-2]sonication (generic) [2-1]sonication (generic) [3-1]none [4-1]none [4-2]none [6-1]none [5-1]none [5-2]none [6-2]sonication (generic) [9-1]sonication (generic) [7-1]sonication (generic) [8-1]
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE3 project
Lab
John Rinn, Broad
Award
U54HG006991 (Bradley Bernstein, Broad)
Project
ENCODE
Aliases
bradley-bernstein:Project Element 1905
Date submitted
July 7, 2016
Date released
May 4, 2016

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleAntibodyLibrary
11K562 cell lineENCBS354VJMENCAB500STAENCLB473XRD
12K562 cell lineENCBS354VJMENCAB696YGRENCLB429WUK
32K562 cell lineENCBS378DFUENCAB696YGRENCLB329YEM
22K562 cell lineENCBS005AIZENCAB696YGRENCLB281FKM
21K562 cell lineENCBS005AIZENCAB500STAENCLB734QBG
31K562 cell lineENCBS378DFUENCAB500STAENCLB672LKB
41K562 cell lineENCBS947YKGENCAB392FIIENCLB429TMF
42K562 cell lineENCBS947YKGENCAB333HSGENCLB893TRF
61K562 cell lineENCBS083ACTENCAB333HSGENCLB284KWN
51K562 cell lineENCBS729ELFENCAB333HSGENCLB508INC
52K562 cell lineENCBS729ELFENCAB392FIIENCLB812KON
62K562 cell lineENCBS083ACTENCAB392FIIENCLB619SXY
91K562 cell lineENCBS216WMIENCAB000BEBENCLB843XVI
71K562 cell lineENCBS532KVAENCAB000BEBENCLB585CJG
81K562 cell lineENCBS323WRWENCAB000BEBENCLB072WQB