1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. liver

Experiment summary for ENCSR521IID

doi:10.17989/ENCSR521IID

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
MAX
Biosample summary
Homo sapiens with nonobstructive coronary artery disease; liver tissue male adult (32 years)
Biosample Type
tissue
Replication type
isogenic
Description
Chip-Seq on MAX-human
Nucleic acid type
DNA
Fragmentation methods
see document

Attribution

ENCODE3 project
Lab
Richard Myers, HAIB
Award
U54HG006998 (Richard Myers, HAIB)
Project
ENCODE
External resources
Aliases
richard-myers:SL77679-SL87909
Date submitted
September 30, 2015
Date released
June 30, 2016
Annotation (gkmsvm-model)
Annotation (BPNet-model)
Submitter comment
This experiment is being used in the ENCODE-DREAM Transcription Factor Binding Site Prediction Challenge (https://www.synapse.org/#!Synapse:syn6131484/wiki/400026). The files will be unavailable until after the challenge completes on 09-30-16. UPDATE: There will be a second round to the challenge that is expected to end on 01-11-2017
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2Search for all Experiment with internal tag DREAM

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens male adult (32 years) with nonobstructive coronary artery disease; liver tissueENCBS046RNAENCAB000AILENCLB802SIR
21Homo sapiens male adult (32 years) with nonobstructive coronary artery disease; liver tissueENCBS046RNAENCAB000AILENCLB188XWI

Files

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