Experiment summary for ENCSR485TLP
doi:10.17989/ENCSR485TLP
Summary
- Status
- released
- Assay
- ATAC-seq
- Biosample summary
- Homo sapiens GM23338
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- ATAC-seq on human cell line PGP1
- Nucleic acid type
- DNA
- Size range
- 200-7000
- Fragmentation methods
- chemical (Tn5 transposase)
- Platform
- Illumina NovaSeq 6000
Attribution
ENCODE4 project
- Lab
- Michael Snyder, Stanford
- Award
- UM1HG009442 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Aliases
- michael-snyder:pAS-136, michael-snyder:pAS-PGP1 bulk ATAC
- Date submitted
- August 4, 2019
- Date released
- August 5, 2020
- Reference Epigenome
- ENCSR769ZAH
- Annotation (gkmsvm-model)
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens GM23338 cell line | ENCBS057LKL | ENCLB501SUW |
| 3 | 1 | Homo sapiens GM23338 cell line | ENCBS994YIB | ENCLB317QGI |
| 2 | 1 | Homo sapiens GM23338 cell line | ENCBS247UHY | ENCLB629USE |