Experiment summary for ENCSR359CVC
doi:10.17989/ENCSR359CVC
Summary
- Status
- released
- Assay
- small RNA-seq
- Biosample summary
- Homo sapiens thyroid gland tissue female adult (53 years)
- Biosample Type
- tissue
- Replication type
- unreplicated
- Description
- The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's thyroid gland tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
- Treatments
- Tobacco Acid Pyrophosphatase for 1 hour
- Nucleic acid type
- RNA
- RNA integrity number
- 6.9
- Depleted in
- rRNA
- Size range
- <200
- Fragmentation methods
- see document
- Strand specificity
- Strand-specific (forward)
- Platform
- Illumina NextSeq 500
Attribution
ENCODE3 project
- Lab
- Thomas Gingeras, CSHL
- Award
- U54HG007004 (Thomas Gingeras, CSHL)
- Project
- ENCODE
- External resources
- Date submitted
- April 11, 2016
- Date released
- May 23, 2016
- Reference Epigenome
- ENCSR383YYH
- Annotation (physical modeling)
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens female adult (53 years) thyroid gland tissue | ENCBS207DLU | ENCLB489WBR |