1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. HCT116

Experiment summary for ENCSR352EIC

doi:10.17989/ENCSR352EIC

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens HCT116 genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, (insertion) using CRISPR targeting H. sapiens SMARCA5
Biosample Type
cell line
Replication type
unreplicated
Nucleic acid type
DNA
Size range
200-600
Controls

Attribution

ENCODE4 project
Lab
Bradley Bernstein, Broad
Award
UM1HG009390 (Bradley Bernstein, Broad)
Project
ENCODE
External resources
Aliases
bradley-bernstein:Project Element 7419
Date released
July 21, 2022
Gene Silencing Series
ENCSR201TKX 
Annotation (physical modeling)
Tags
Search for all Experiment with internal tag RegulomeDB_2_2Search for all Experiment with internal tag DegronSearch for all Experiment with internal tag RegulomeDB_2_1

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
12Homo sapiens HCT116 cell line genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, genetically modified (insertion) using CRISPR targeting H. sapiens SMARCA5ENCBS889ZMEENCGM135HZR, ENCGM628AIRENCAB719MQZENCLB757YGC
11Homo sapiens HCT116 cell line genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, genetically modified (insertion) using CRISPR targeting H. sapiens SMARCA5ENCBS889ZMEENCGM135HZR, ENCGM628AIRENCAB719MQZENCLB796DQF

Files

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Replicates

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