Experiment summary for ENCSR291GJU
doi:10.17989/ENCSR291GJU
Summary
- Status
- released
- Assay
- ATAC-seq
- Biosample summary
- Homo sapiens HepG2
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- ATAC-seq on human cell line HepG2
- Nucleic acid type
- DNA
- Size range
- 200-7000
- Fragmentation methods
- chemical (Tn5 transposase)
- Platform
- Illumina NovaSeq 6000
Attribution
ENCODE4 project
- Lab
- Michael Snyder, Stanford
- Award
- UM1HG009442 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Aliases
- michael-snyder:pAS-137, michael-snyder:pAS-HepG2 bulk ATAC
- Date submitted
- August 1, 2019
- Date released
- August 5, 2020
- Reference Epigenome
- ENCSR888GEN
- Annotation (gkmsvm-model)
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
---|---|---|---|---|
1 | 1 | Homo sapiens HepG2 cell line | ENCBS353INV | ENCLB050LMI |
3 | 1 | Homo sapiens HepG2 cell line | ENCBS827CSM | ENCLB524DHQ |
2 | 1 | Homo sapiens HepG2 cell line | ENCBS710QMG | ENCLB750JRI |