Experiment summary for ENCSR290MUH

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
GABPA
Biosample summary
Homo sapiens K562 genetically modified using stable transfection
Biosample Type
cell line
Replication type
isogenic
Description
eGFP-GABPA ChIP-seq on human K562
Nucleic acid type
DNA
Size range
200-800
Fragmentation methods
sonication (Bioruptor generic)
Size selection method
SPRI
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE3 project
Lab
Kevin White, UChicago
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
kevin-white:GABPA_K562
Date submitted
March 14, 2016
Date released
June 13, 2016
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
21K562 cell line stably expressing C-terminal eGFP-tagged GABPAENCBS021UXCENCGM292VONENCAB728YTOENCLB530CXT
11K562 cell line stably expressing C-terminal eGFP-tagged GABPAENCBS084QBRENCGM292VONENCAB728YTOENCLB234YCU