Experiment summary for ENCSR261VAS

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens smooth muscle cell originated from H9
Biosample Type
in vitro differentiated cells
Replication type
isogenic
Nucleic acid type
DNA
Library starting quantity
2.1ng
Size range
200-600
Fragmentation methods
sonication (generic)
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE3 project
Lab
Bradley Bernstein, Broad
Award
U54HG006991 (Bradley Bernstein, Broad)
Project
ENCODE
Aliases
bradley-bernstein:Project Element 2042
Date submitted
April 11, 2016
Date released
December 3, 2017
Related datasets
ENCSR116JEF 
Reference epigenome for human H9-derived smooth muscle cell
Submitter comment
One of the replicates was much higher quality than the other.
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5Search for all Experiment with internal tag SESCCSearch for all Experiment with internal tag ccre_inputv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21female embryo (5 days) smooth muscle in vitro differentiated cells originated from H9ENCBS780PCJENCAB000AXXENCLB830DOQ
11female embryo (5 days) smooth muscle in vitro differentiated cells originated from H9ENCBS899TTJENCAB000AXXENCLB380MYK