Experiment summary for ENCSR214BLK
doi:10.17989/ENCSR214BLK
Summary
- Status
- released
- Assay
- ChIA-PET
- Target
- CTCF
- Biosample summary
- Mus musculus strain 129S1CastF1 embryonic stem cell male embryo
- Biosample Type
- primary cell
- Replication type
- isogenic
- Description
- CTCF ChIA-PET in 129S1CastF1
- Nucleic acid type
- DNA
- Size range
- 350-600
- Lysis method
- SDS
- Fragmentation methods
- sonication (Branson Sonifier 250)
- Size selection method
- BluePippin
- Platform
- Illumina NovaSeq 6000
Attribution
ENCODE4 project
- Lab
- Charles Lee
- Award
- 3UM1HG009409-04S1 (Charles Lee)
- Project
- ENCODE
- External resources
- Aliases
- yijun-ruan:129S1CastF1_CTCF
- Date submitted
- August 17, 2021
- Date released
- January 21, 2022
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 1 | 1 | Mus musculus strain 129S1CastF1 male embryo embryonic stem primary cell | ENCBS648RIM | ENCAB635SXP | ENCLB844IKU |
| 2 | 1 | Mus musculus strain 129S1CastF1 male embryo embryonic stem primary cell | ENCBS355CPY | ENCAB635SXP | ENCLB443HVH |