Experiment summary for ENCSR138ITT
doi:10.17989/ENCSR138ITT
Summary
- Status
- released
- Assay
- Mint-ChIP-seq
- Target
- H3K27ac
- Biosample summary
- Homo sapiens HCT116 genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, (insertion) using CRISPR targeting H. sapiens SMARCA5 treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours
- Biosample Type
- cell line
- Replication type
- unreplicated
- Treatments
- 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours
- Nucleic acid type
- DNA
- Platform
- Illumina NextSeq 500
- Controls
Attribution
ENCODE4 project
- Lab
- Bradley Bernstein, Broad
- Award
- UM1HG009390 (Bradley Bernstein, Broad)
- Project
- ENCODE
- External resources
- Aliases
- bradley-bernstein:Project Element 7015
- Date released
- March 28, 2022
- Gene Silencing Series
- ENCSR153RXK
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
|---|---|---|---|---|---|---|
| 1 | 2 | Homo sapiens HCT116 cell line genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, genetically modified (insertion) using CRISPR targeting H. sapiens SMARCA5 treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours | ENCBS403YHB | ENCGM628AIR, ENCGM135HZR | ENCAB557LLB | ENCLB302VEM |
| 1 | 1 | Homo sapiens HCT116 cell line genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, genetically modified (insertion) using CRISPR targeting H. sapiens SMARCA5 treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours | ENCBS403YHB | ENCGM628AIR, ENCGM135HZR | ENCAB557LLB | ENCLB087HWG |