1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. neural progenitor cell

Experiment summary for ENCSR125NBL

doi:10.17989/ENCSR125NBL

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens neural progenitor cell originated from H9
Biosample Type
in vitro differentiated cells
Replication type
isogenic
Nucleic acid type
DNA
Library starting quantity
8.382ng
Size range
200-600
Fragmentation methods
sonication (generic)
Controls

Attribution

ENCODE3 project
Lab
Bradley Bernstein, Broad
Award
U54HG006991 (Bradley Bernstein, Broad)
Project
ENCODE
External resources
Aliases
bradley-bernstein:Project Element 2025
Date submitted
April 11, 2016
Date released
October 19, 2017
Reference Epigenome
ENCSR372BDU 
Annotation (gkmsvm-model)
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Visit collection page for SESCCSearch for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens female embryo (5 days) neural progenitor in vitro differentiated cells originated from H9ENCBS044KWEENCAB000AXXENCLB054TGL
21Homo sapiens female embryo (5 days) neural progenitor in vitro differentiated cells originated from H9ENCBS018TPTENCAB000AXXENCLB525MCC
12Homo sapiens female embryo (5 days) neural progenitor in vitro differentiated cells originated from H9ENCBS044KWEENCAB000AXXENCLB449ICV

Files

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Replicates

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