Experiment summary for ENCSR125NBL
doi:10.17989/ENCSR125NBL
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- CTCF
- Biosample summary
- Homo sapiens neural progenitor cell originated from H9
- Biosample Type
- in vitro differentiated cells
- Replication type
- isogenic
- Nucleic acid type
- DNA
- Library starting quantity
- 8.382ng
- Size range
- 200-600
- Fragmentation methods
- sonication (generic)
- Platform
- Illumina HiSeq 2500
- Controls
Attribution
ENCODE3 project
- Lab
- Bradley Bernstein, Broad
- Award
- U54HG006991 (Bradley Bernstein, Broad)
- Project
- ENCODE
- External resources
- References
- Aliases
- bradley-bernstein:Project Element 2025
- Date submitted
- April 11, 2016
- Date released
- October 19, 2017
- Reference Epigenome
- ENCSR372BDU
- Annotation (gkmsvm-model)
- Registry of cCREs
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
1 | 1 | Homo sapiens female embryo (5 days) neural progenitor in vitro differentiated cells originated from H9 | ENCBS044KWE | ENCAB000AXX | ENCLB054TGL |
2 | 1 | Homo sapiens female embryo (5 days) neural progenitor in vitro differentiated cells originated from H9 | ENCBS018TPT | ENCAB000AXX | ENCLB525MCC |
1 | 2 | Homo sapiens female embryo (5 days) neural progenitor in vitro differentiated cells originated from H9 | ENCBS044KWE | ENCAB000AXX | ENCLB449ICV |