Experiment summary for ENCSR000FCN
doi:10.17989/ENCSR000FCN
Summary
- Status
- released
- Assay
- ChIP-seq (Histone ChIP-seq)
- Target
- H3K9me3
- Biosample summary
- Homo sapiens Panc1
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- H3K9me3 PANC1 ChIP-Seq
- Nucleic acid type
- DNA
- Size range
- 200-500
- Fragmentation methods
- sonication (Bioruptor generic)
- Size selection method
- Invitrogen EGel EX 2% agarose (Cat# G402002)
- Platform
- Illumina Genome Analyzer IIx
- Controls
Attribution
ENCODE2 project
- Lab
- Peggy Farnham, USC
- Award
- U54HG004558 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Date submitted
- March 13, 2014
- Date released
- July 7, 2014
- Reference Epigenome
- ENCSR518LTW
- Annotation (physical modeling)
- Submitter comment
- Cross-correlation metrics are too poor to permit further analysis.
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens Panc1 cell line | ENCBS467AAA | ENCAB000ANQ | ENCLB555ABO |
| 2 | 1 | Homo sapiens Panc1 cell line | ENCBS466AAA | ENCAB000ANQ | ENCLB555ABP |