1. Experiments
  2. DNase-seq
  3. Homo sapiens
  4. GM03348

Experiment summary for ENCSR000EIR

doi:10.17989/ENCSR000EIR

Summary

Status
released
Assay
DNase-seq
Biosample summary
Homo sapiens GM03348 genetically modified (insertion) using transduction targeting H. sapiens MYOD1
Biosample Type
cell line
Replication type
unreplicated
Description
DNase-seq on human fibroblast (GM03348) treated with lentiviral control
Nucleic acid type
DNA
Fragmentation methods
see document

Attribution

ENCODE2 project
Lab
Gregory Crawford, Duke
Award
U54HG004563 (Gregory Crawford, Duke)
Project
ENCODE
Date submitted
January 11, 2011
Date released
August 28, 2012
Annotation (gkmsvm-model)
Submitter comment
The data quality is too poor for processing.
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag RegulomeDB_2_2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Library
12Homo sapiens GM03348 cell line genetically modified (insertion) using transduction targeting H. sapiens MYOD1ENCBS559ENCENCGM883SVNENCLB601XFC
11Homo sapiens GM03348 cell line genetically modified (insertion) using transduction targeting H. sapiens MYOD1ENCBS559ENCENCGM883SVNENCLB693CLM

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