Experiment summary for ENCSR000EGK
doi:10.17989/ENCSR000EGK
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- IRF1
- Biosample summary
- Homo sapiens K562 treated with Interferon gamma for 30 minutes
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- IRF1 ChIP-seq on human K562 treated with IFNg30 produced by the Snyder lab
- Treatments
- Interferon gamma (UniProtKB:P01579) for 30 minutes
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina Genome Analyzer
- Controls
Attribution
ENCODE2 project
- Lab
- Michael Snyder, Stanford
- Award
- U54HG004558 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Date submitted
- May 14, 2012
- Date released
- May 14, 2012
- Annotation (gkmsvm-model)
- Annotation (BPNet-model)
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
1 | 1 | Homo sapiens K562 cell line treated with Interferon gamma for 30 minutes | ENCBS788AAA | ENCAB000AHX | ENCLB209APZ |
2 | 1 | Homo sapiens K562 cell line treated with Interferon gamma for 30 minutes | ENCBS788AAA | ENCAB000AHX | ENCLB209AVF |