1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. K562

Experiment summary for ENCSR000EGK

doi:10.17989/ENCSR000EGK

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
IRF1
Biosample summary
Homo sapiens K562 treated with Interferon gamma for 30 minutes
Biosample Type
cell line
Replication type
isogenic
Description
IRF1 ChIP-seq on human K562 treated with IFNg30 produced by the Snyder lab
Treatments
Interferon gamma (UniProtKB:P01579) for 30 minutes
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE2 project
Lab
Michael Snyder, Stanford
Award
U54HG004558 (Michael Snyder, Stanford)
Project
ENCODE
Date submitted
May 14, 2012
Date released
May 14, 2012
Annotation (gkmsvm-model)
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_2_2Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_0

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens K562 cell line treated with Interferon gamma for 30 minutesENCBS788AAAENCAB000AHXENCLB209APZ
21Homo sapiens K562 cell line treated with Interferon gamma for 30 minutesENCBS788AAAENCAB000AHXENCLB209AVF

Files

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Replicates

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