Experiment summary for ENCSR000EET

doi:10.17989/ENCSR000EET

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
HSF1
Biosample summary
Homo sapiens HepG2 treated with 1 mM pyruvate for 6 hours, 1 μM forskolin for 6 hours
Biosample Type
cell line
Replication type
isogenic
Description
HSF1 ChIP-seq on human HepG2 treated with forskolin
Treatments
1 mM pyruvate (CHEBI:15361) for 6 hours, 1 μM forskolin (CHEBI:42471) for 6 hours
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE2 project
Lab
Michael Snyder, Stanford
Award
U54HG004558 (Michael Snyder, Stanford)
Project
ENCODE
Date submitted
October 29, 2011
Date released
October 29, 2011
Annotation (gkmsvm-model)
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21Homo sapiens HepG2 cell line treated with 1 mM pyruvate for 6 hours, 1 μM forskolin for 6 hoursENCBS848AAAENCAB000AHSENCLB209ART
11Homo sapiens HepG2 cell line treated with 1 mM pyruvate for 6 hours, 1 μM forskolin for 6 hoursENCBS848AAAENCAB000AHSENCLB209ARS