1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. GM12878

Experiment summary for ENCSR000DZL

doi:10.17989/ENCSR000DZL

Summary

Status
revoked
Assay
ChIP-seq (TF ChIP-seq)
Target
ZNF143
Biosample summary
Homo sapiens GM12878
Biosample Type
cell line
Replication type
isogenic
Description
ZNF143 ChIP-seq on human GM12878
Nucleic acid type
DNA
Fragmentation methods
see document

Attribution

ENCODE2 project
Lab
Michael Snyder, Stanford
Award
U54HG004558 (Michael Snyder, Stanford)
Project
ENCODE
Date submitted
October 29, 2011
Date released
October 29, 2011
Annotation (gkmsvm-model)
Submitter comment
The data has been revoked because the antibody used in this assay has been shown to be cross-reactive to CTCF in https://www.biorxiv.org/content/10.1101/2024.03.08.583864v1
Tags
Search for all Experiment with internal tag RegulomeDB_2_2Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_0

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21Homo sapiens GM12878 cell lineENCBS630AAAENCAB000AMRENCLB209ACX
11Homo sapiens GM12878 cell lineENCBS630AAAENCAB000AMRENCLB209ACW

Files

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Output type
Replicates

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