Experiment summary for ENCSR000DDG
doi:10.17989/ENCSR000DDG
Summary
- Status
- released
- Assay
- RRBS
- Biosample summary
- Homo sapiens MCF-7 expressing RNAi targeting H. sapiens CTCF
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- RRBS on MCF-7 treated with CTCF shRNA knockdown
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina HiSeq 2000
Attribution
ENCODE2 project
- Lab
- Richard Myers, HAIB
- Award
- U54HG004576 (Richard Myers, HAIB)
- Project
- ENCODE
- External resources
- Date submitted
- August 31, 2011
- Date released
- July 30, 2012
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 2 | 1 | Homo sapiens MCF-7 cell line expressing RNAi targeting H. sapiens CTCF | ENCBS094ENC | ENCGM116LDX | ENCLB704BOJ |
| 1 | 1 | Homo sapiens MCF-7 cell line expressing RNAi targeting H. sapiens CTCF | ENCBS094ENC | ENCGM116LDX | ENCLB434SLW |