Experiment summary for ENCSR000BKW

Summary

Status
released
Assay
ChIP-seq
Target
FOXA1
Biosample summary
Homo sapiens Ishikawa treated with 0.02% dimethyl sulfoxide for 1 hour
Biosample Type
cell line
Replication type
isogenic
Description
FOXA1 ChIP-seq protocol v041610.2 on human ECC-1 treated with 0.02% DMSO. Note- This experiment previously referred to its biosample as ECC-1, however it has been found that all currently available ECC-1 are actually Ishikawa cells.
Treatments
0.02 percent dimethyl sulfoxide (CHEBI:28262) for 1 hour
Nucleic acid type
DNA
Lysis method
see document
Extraction method
see document
Fragmentation method
see document
Size selection method
see document
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE2 project
Lab
Richard Myers, HAIB
Award
U54HG004576 (Richard Myers, HAIB)
Project
ENCODE
Date submitted
July 18, 2011
Date released
July 18, 2011
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv4

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleAntibodyLibrary
21Ishikawa cell line treated with 0.02% dimethyl sulfoxide for 1 hourENCBS312UTVENCAB000AGNENCLB559JRD
11Ishikawa cell line treated with 0.02% dimethyl sulfoxide for 1 hourENCBS312UTVENCAB000AGNENCLB559KAN