Experiment summary for ENCSR000AUC

doi:10.17989/ENCSR000AUC

Alternate accession: ENCSR285DDQ

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
SUZ12
Biosample summary
Homo sapiens K562
Biosample Type
cell line
Replication type
isogenic
Description
ChIP-seq on human K562 SUZ12
Nucleic acid type
DNA
Library starting quantity
19.2ng [3-1]9.2ng [2-1]
Size range
200-600
Fragmentation methods
see document [1-1]sonication (generic) [3-1]none [2-1]
Controls

Attribution

ENCODE2 project
Lab
Bradley Bernstein, Broad
Award
U54HG004570 (Bradley Bernstein, Broad)
Project
ENCODE
Aliases
bradley-bernstein:Project Element 652
Date submitted
August 6, 2012
Date released
August 6, 2012
Annotation (gkmsvm-model)
Submitter comment
As of June 8th 2018, this experiment has been run through the uniform processing pipeline for both assemblies.
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens K562 cell lineENCBS674MPNENCAB000ALKENCLB695ASU
31Homo sapiens K562 cell lineENCBS984VNRENCAB741YHGENCLB513MSM
21Homo sapiens K562 cell lineENCBS658RMIENCAB741YHGENCLB917HJC