Experiment summary for ENCSR000AKE

  • Status: released

Summary

Assay
ChIP-seq
Target
H3K36me3
Biosample summary
Homo sapiens GM12878
Biosample Type
immortalized cell line
Replication type
isogenic
Description
H3K36me3 ChIP-seq on human GM12878
Nucleic acid type
DNA
Lysis method
see document
Extraction method
see document
Fragmentation method
see document
Size selection method
see document
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE2 project
Lab
Bradley Bernstein, Broad
Award
U54HG004570 (Bradley Bernstein, Broad)
Project
ENCODE
Date released
February 10, 2011
Related datasets
ENCSR447YYN 
Reference Epigenome of GM12878
Submitter comment
Cross-correlation metrics are too poor to permit further analysis. Fastq file ENCFF000ATN contains reads of mixed lengths. Read lengths followed by respective number of reads: (47, 11171766), (51, 11185435)
Tags
ENCYCLOPEDIAv4 tag

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleAntibodyLibrary
11GM12878 immortalized cell lineENCBS715VCPENCAB000ADUENCLB695AGK
21GM12878 immortalized cell lineENCBS830CIQENCAB000ADUENCLB695AQR