1. Experiments
  2. DNase-seq
  3. Homo sapiens
  4. osteoblast

Experiment summary for ENCSR000ELJ

doi:10.17989/ENCSR000ELJ

Summary

Status
released
Assay
DNase-seq
Biosample summary
Homo sapiens osteoblast
Biosample Type
primary cell
Replication type
unreplicated
Description
DNase-seq on human osteoblast
Nucleic acid type
DNA
Fragmentation methods
see document

Attribution

ENCODE2 project
Lab
Gregory Crawford, Duke
Award
U54HG004563 (Gregory Crawford, Duke)
Project
ENCODE
Date submitted
January 11, 2011
Date released
April 19, 2011
Reference Epigenome
ENCSR842HZB 
Annotation (gkmsvm-model)
Submitter comment
A dispersion model could not be successfully generated for this dataset, so the DNase-seq pipeline's footprinting step was skipped for this analysis.
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag RegulomeDB_2_2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Homo sapiens osteoblast primary cellENCBS342AAAENCLB766DWN
13Homo sapiens osteoblast primary cellENCBS342AAAENCLB023ZYI
12Homo sapiens osteoblast primary cellENCBS342AAAENCLB906BCL

Files

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Replicates

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