Stem cell differentiation

List Report

H9 Stem Cells

Data generated for cell types differentiated from the H9 human embryonic stem cell line.

Endoderm

Mesoderm

Ectoderm

Stem

Mesoderm + Ectoderm

Assay

Biosample

	Histone and Mint ChIP-seq Histone and Mint ChIP-seq													TF ChIP-seq TF ChIP-seq														ChIA-PET ChIA-PET
	H3K4me1 target for Histone and Mint ChIP-seq Assay	H3K4me3 target for Histone and Mint ChIP-seq Assay	H3K36me3 target for Histone and Mint ChIP-seq Assay	H3K9me3 target for Histone and Mint ChIP-seq Assay	H3K27me3 target for Histone and Mint ChIP-seq Assay	H2AFZ target for Histone and Mint ChIP-seq Assay	H3K27ac target for Histone and Mint ChIP-seq Assay	H3K4me2 target for Histone and Mint ChIP-seq Assay	H3K79me2 target for Histone and Mint ChIP-seq Assay	H3K9ac target for Histone and Mint ChIP-seq Assay	H4K20me1 target for Histone and Mint ChIP-seq Assay	H3F3A target for Histone and Mint ChIP-seq Assay	H3K9me2 target for Histone and Mint ChIP-seq Assay	CTCF target for TF ChIP-seq Assay	EZH2 target for TF ChIP-seq Assay	EZH2phosphoT487 target for TF ChIP-seq Assay	DNase-seq Assay	microRNA-seq Assay	total RNA-seq Assay	Repli-chip Assay	snATAC-seq Assay	long read RNA-seq Assay	WGBS Assay	DNAme array Assay	RAMPAGE Assay	microRNA counts Assay	small RNA-seq Assay	RAD21 target for ChIA-PET Assay	polyA plus RNA-seq Assay	genotyping array Assay
in vitro differentiated cells
neural progenitor cell Biosample	Search in vitro differentiated cells, neural progenitor cell for Mint-ChIP-seq, H3K4me1	Search in vitro differentiated cells, neural progenitor cell for Mint-ChIP-seq, H3K4me3	Search in vitro differentiated cells, neural progenitor cell for Mint-ChIP-seq, H3K36me3	Search in vitro differentiated cells, neural progenitor cell for Mint-ChIP-seq, H3K9me3	Search in vitro differentiated cells, neural progenitor cell for Mint-ChIP-seq, H3K27me3	Search in vitro differentiated cells, neural progenitor cell for Histone ChIP-seq, H2AFZ	Search in vitro differentiated cells, neural progenitor cell for Mint-ChIP-seq, H3K27ac	Search in vitro differentiated cells, neural progenitor cell for Histone ChIP-seq, H3K4me2	Search in vitro differentiated cells, neural progenitor cell for Histone ChIP-seq, H3K79me2	Search in vitro differentiated cells, neural progenitor cell for Histone ChIP-seq, H3K9ac	Search in vitro differentiated cells, neural progenitor cell for Histone ChIP-seq, H4K20me1	Search in vitro differentiated cells, neural progenitor cell for Histone ChIP-seq, H3F3A		Search in vitro differentiated cells, neural progenitor cell for TF ChIP-seq, CTCF	Search in vitro differentiated cells, neural progenitor cell for TF ChIP-seq, EZH2	Search in vitro differentiated cells, neural progenitor cell for TF ChIP-seq, EZH2phosphoT487	Search in vitro differentiated cells, neural progenitor cell for DNase-seq	Search in vitro differentiated cells, neural progenitor cell for microRNA-seq	Search in vitro differentiated cells, neural progenitor cell for total RNA-seq	Search in vitro differentiated cells, neural progenitor cell for Repli-chip				Search in vitro differentiated cells, neural progenitor cell for DNAme array	Search in vitro differentiated cells, neural progenitor cell for RAMPAGE	Search in vitro differentiated cells, neural progenitor cell for microRNA counts	Search in vitro differentiated cells, neural progenitor cell for small RNA-seq	Search in vitro differentiated cells, neural progenitor cell for ChIA-PET, RAD21
hepatocyte Biosample	Search in vitro differentiated cells, hepatocyte for Histone ChIP-seq, H3K4me1	Search in vitro differentiated cells, hepatocyte for Histone ChIP-seq, H3K4me3	Search in vitro differentiated cells, hepatocyte for Histone ChIP-seq, H3K36me3	Search in vitro differentiated cells, hepatocyte for Histone ChIP-seq, H3K9me3	Search in vitro differentiated cells, hepatocyte for Histone ChIP-seq, H3K27me3	Search in vitro differentiated cells, hepatocyte for Histone ChIP-seq, H2AFZ	Search in vitro differentiated cells, hepatocyte for Histone ChIP-seq, H3K27ac	Search in vitro differentiated cells, hepatocyte for Histone ChIP-seq, H3K4me2	Search in vitro differentiated cells, hepatocyte for Histone ChIP-seq, H3K79me2	Search in vitro differentiated cells, hepatocyte for Histone ChIP-seq, H3K9ac	Search in vitro differentiated cells, hepatocyte for Histone ChIP-seq, H4K20me1		Search in vitro differentiated cells, hepatocyte for Histone ChIP-seq, H3K9me2	Search in vitro differentiated cells, hepatocyte for TF ChIP-seq, CTCF	Search in vitro differentiated cells, hepatocyte for TF ChIP-seq, EZH2	Search in vitro differentiated cells, hepatocyte for TF ChIP-seq, EZH2phosphoT487	Search in vitro differentiated cells, hepatocyte for DNase-seq	Search in vitro differentiated cells, hepatocyte for microRNA-seq	Search in vitro differentiated cells, hepatocyte for total RNA-seq				Search in vitro differentiated cells, hepatocyte for WGBS	Search in vitro differentiated cells, hepatocyte for DNAme array	Search in vitro differentiated cells, hepatocyte for RAMPAGE	Search in vitro differentiated cells, hepatocyte for microRNA counts	Search in vitro differentiated cells, hepatocyte for small RNA-seq	Search in vitro differentiated cells, hepatocyte for ChIA-PET, RAD21	Search in vitro differentiated cells, hepatocyte for polyA plus RNA-seq
smooth muscle cell Biosample	Search in vitro differentiated cells, smooth muscle cell for Histone ChIP-seq, H3K4me1	Search in vitro differentiated cells, smooth muscle cell for Histone ChIP-seq, H3K4me3	Search in vitro differentiated cells, smooth muscle cell for Histone ChIP-seq, H3K36me3	Search in vitro differentiated cells, smooth muscle cell for Histone ChIP-seq, H3K9me3	Search in vitro differentiated cells, smooth muscle cell for Histone ChIP-seq, H3K27me3	Search in vitro differentiated cells, smooth muscle cell for Histone ChIP-seq, H2AFZ	Search in vitro differentiated cells, smooth muscle cell for Histone ChIP-seq, H3K27ac	Search in vitro differentiated cells, smooth muscle cell for Histone ChIP-seq, H3K4me2	Search in vitro differentiated cells, smooth muscle cell for Histone ChIP-seq, H3K79me2	Search in vitro differentiated cells, smooth muscle cell for Histone ChIP-seq, H3K9ac	Search in vitro differentiated cells, smooth muscle cell for Histone ChIP-seq, H4K20me1	Search in vitro differentiated cells, smooth muscle cell for Histone ChIP-seq, H3F3A		Search in vitro differentiated cells, smooth muscle cell for TF ChIP-seq, CTCF				Search in vitro differentiated cells, smooth muscle cell for microRNA-seq	Search in vitro differentiated cells, smooth muscle cell for total RNA-seq	Search in vitro differentiated cells, smooth muscle cell for Repli-chip			Search in vitro differentiated cells, smooth muscle cell for WGBS	Search in vitro differentiated cells, smooth muscle cell for DNAme array	Search in vitro differentiated cells, smooth muscle cell for RAMPAGE	Search in vitro differentiated cells, smooth muscle cell for microRNA counts	Search in vitro differentiated cells, smooth muscle cell for small RNA-seq		Search in vitro differentiated cells, smooth muscle cell for polyA plus RNA-seq	Search in vitro differentiated cells, smooth muscle cell for genotyping array
neural crest cell Biosample	Search in vitro differentiated cells, neural crest cell for Mint-ChIP-seq, H3K4me1	Search in vitro differentiated cells, neural crest cell for Mint-ChIP-seq, H3K4me3	Search in vitro differentiated cells, neural crest cell for Mint-ChIP-seq, H3K36me3	Search in vitro differentiated cells, neural crest cell for Mint-ChIP-seq, H3K9me3	Search in vitro differentiated cells, neural crest cell for Mint-ChIP-seq, H3K27me3		Search in vitro differentiated cells, neural crest cell for Mint-ChIP-seq, H3K27ac							Search in vitro differentiated cells, neural crest cell for TF ChIP-seq, CTCF			Search in vitro differentiated cells, neural crest cell for DNase-seq	Search in vitro differentiated cells, neural crest cell for microRNA-seq	Search in vitro differentiated cells, neural crest cell for total RNA-seq	Search in vitro differentiated cells, neural crest cell for Repli-chip	Search in vitro differentiated cells, neural crest cell for snATAC-seq	Search in vitro differentiated cells, neural crest cell for long read RNA-seq
chondrocyte Biosample	Search in vitro differentiated cells, chondrocyte for Mint-ChIP-seq, H3K4me1	Search in vitro differentiated cells, chondrocyte for Mint-ChIP-seq, H3K4me3	Search in vitro differentiated cells, chondrocyte for Mint-ChIP-seq, H3K36me3	Search in vitro differentiated cells, chondrocyte for Mint-ChIP-seq, H3K9me3	Search in vitro differentiated cells, chondrocyte for Mint-ChIP-seq, H3K27me3		Search in vitro differentiated cells, chondrocyte for Mint-ChIP-seq, H3K27ac							Search in vitro differentiated cells, chondrocyte for TF ChIP-seq, CTCF			Search in vitro differentiated cells, chondrocyte for DNase-seq	Search in vitro differentiated cells, chondrocyte for microRNA-seq	Search in vitro differentiated cells, chondrocyte for total RNA-seq		Search in vitro differentiated cells, chondrocyte for snATAC-seq	Search in vitro differentiated cells, chondrocyte for long read RNA-seq
endodermal cell Biosample	Search in vitro differentiated cells, endodermal cell for Mint-ChIP-seq, H3K4me1	Search in vitro differentiated cells, endodermal cell for Mint-ChIP-seq, H3K4me3	Search in vitro differentiated cells, endodermal cell for Mint-ChIP-seq, H3K36me3	Search in vitro differentiated cells, endodermal cell for Mint-ChIP-seq, H3K9me3	Search in vitro differentiated cells, endodermal cell for Mint-ChIP-seq, H3K27me3		Search in vitro differentiated cells, endodermal cell for Mint-ChIP-seq, H3K27ac							Search in vitro differentiated cells, endodermal cell for TF ChIP-seq, CTCF			Search in vitro differentiated cells, endodermal cell for DNase-seq	Search in vitro differentiated cells, endodermal cell for microRNA-seq	Search in vitro differentiated cells, endodermal cell for total RNA-seq		Search in vitro differentiated cells, endodermal cell for snATAC-seq	Search in vitro differentiated cells, endodermal cell for long read RNA-seq
mesothelial cell of epicardium Biosample	Search in vitro differentiated cells, mesothelial cell of epicardium for Mint-ChIP-seq, H3K4me1	Search in vitro differentiated cells, mesothelial cell of epicardium for Mint-ChIP-seq, H3K4me3	Search in vitro differentiated cells, mesothelial cell of epicardium for Mint-ChIP-seq, H3K36me3	Search in vitro differentiated cells, mesothelial cell of epicardium for Mint-ChIP-seq, H3K9me3	Search in vitro differentiated cells, mesothelial cell of epicardium for Mint-ChIP-seq, H3K27me3		Search in vitro differentiated cells, mesothelial cell of epicardium for Mint-ChIP-seq, H3K27ac							Search in vitro differentiated cells, mesothelial cell of epicardium for TF ChIP-seq, CTCF			Search in vitro differentiated cells, mesothelial cell of epicardium for DNase-seq	Search in vitro differentiated cells, mesothelial cell of epicardium for microRNA-seq	Search in vitro differentiated cells, mesothelial cell of epicardium for total RNA-seq		Search in vitro differentiated cells, mesothelial cell of epicardium for snATAC-seq
osteocyte Biosample	Search in vitro differentiated cells, osteocyte for Mint-ChIP-seq, H3K4me1	Search in vitro differentiated cells, osteocyte for Mint-ChIP-seq, H3K4me3	Search in vitro differentiated cells, osteocyte for Mint-ChIP-seq, H3K36me3	Search in vitro differentiated cells, osteocyte for Mint-ChIP-seq, H3K9me3	Search in vitro differentiated cells, osteocyte for Mint-ChIP-seq, H3K27me3		Search in vitro differentiated cells, osteocyte for Mint-ChIP-seq, H3K27ac							Search in vitro differentiated cells, osteocyte for TF ChIP-seq, CTCF			Search in vitro differentiated cells, osteocyte for DNase-seq	Search in vitro differentiated cells, osteocyte for microRNA-seq	Search in vitro differentiated cells, osteocyte for total RNA-seq		Search in vitro differentiated cells, osteocyte for snATAC-seq	Search in vitro differentiated cells, osteocyte for long read RNA-seq
progenitor cell of endocrine pancreas Biosample	Search in vitro differentiated cells, progenitor cell of endocrine pancreas for Mint-ChIP-seq, H3K4me1	Search in vitro differentiated cells, progenitor cell of endocrine pancreas for Mint-ChIP-seq, H3K4me3	Search in vitro differentiated cells, progenitor cell of endocrine pancreas for Mint-ChIP-seq, H3K36me3	Search in vitro differentiated cells, progenitor cell of endocrine pancreas for Mint-ChIP-seq, H3K9me3	Search in vitro differentiated cells, progenitor cell of endocrine pancreas for Mint-ChIP-seq, H3K27me3		Search in vitro differentiated cells, progenitor cell of endocrine pancreas for Mint-ChIP-seq, H3K27ac							Search in vitro differentiated cells, progenitor cell of endocrine pancreas for TF ChIP-seq, CTCF			Search in vitro differentiated cells, progenitor cell of endocrine pancreas for DNase-seq	Search in vitro differentiated cells, progenitor cell of endocrine pancreas for microRNA-seq	Search in vitro differentiated cells, progenitor cell of endocrine pancreas for total RNA-seq		Search in vitro differentiated cells, progenitor cell of endocrine pancreas for snATAC-seq	Search in vitro differentiated cells, progenitor cell of endocrine pancreas for long read RNA-seq
type B pancreatic cell Biosample	Search in vitro differentiated cells, type B pancreatic cell for Mint-ChIP-seq, H3K4me1	Search in vitro differentiated cells, type B pancreatic cell for Mint-ChIP-seq, H3K4me3	Search in vitro differentiated cells, type B pancreatic cell for Mint-ChIP-seq, H3K36me3	Search in vitro differentiated cells, type B pancreatic cell for Mint-ChIP-seq, H3K9me3	Search in vitro differentiated cells, type B pancreatic cell for Mint-ChIP-seq, H3K27me3		Search in vitro differentiated cells, type B pancreatic cell for Mint-ChIP-seq, H3K27ac							Search in vitro differentiated cells, type B pancreatic cell for TF ChIP-seq, CTCF			Search in vitro differentiated cells, type B pancreatic cell for DNase-seq	Search in vitro differentiated cells, type B pancreatic cell for microRNA-seq	Search in vitro differentiated cells, type B pancreatic cell for total RNA-seq		Search in vitro differentiated cells, type B pancreatic cell for snATAC-seq	Search in vitro differentiated cells, type B pancreatic cell for long read RNA-seq
nephron progenitor cell Biosample	Search in vitro differentiated cells, nephron progenitor cell for Mint-ChIP-seq, H3K4me1	Search in vitro differentiated cells, nephron progenitor cell for Mint-ChIP-seq, H3K4me3	Search in vitro differentiated cells, nephron progenitor cell for Mint-ChIP-seq, H3K36me3	Search in vitro differentiated cells, nephron progenitor cell for Mint-ChIP-seq, H3K9me3	Search in vitro differentiated cells, nephron progenitor cell for Mint-ChIP-seq, H3K27me3		Search in vitro differentiated cells, nephron progenitor cell for Mint-ChIP-seq, H3K27ac							Search in vitro differentiated cells, nephron progenitor cell for TF ChIP-seq, CTCF			Search in vitro differentiated cells, nephron progenitor cell for DNase-seq
neuronal stem cell Biosample	Search in vitro differentiated cells, neuronal stem cell for Histone ChIP-seq, H3K4me1	Search in vitro differentiated cells, neuronal stem cell for Histone ChIP-seq, H3K4me3	Search in vitro differentiated cells, neuronal stem cell for Histone ChIP-seq, H3K36me3	Search in vitro differentiated cells, neuronal stem cell for Histone ChIP-seq, H3K9me3	Search in vitro differentiated cells, neuronal stem cell for Histone ChIP-seq, H3K27me3	Search in vitro differentiated cells, neuronal stem cell for Histone ChIP-seq, H2AFZ																	Search in vitro differentiated cells, neuronal stem cell for WGBS
neuron Biosample	Search in vitro differentiated cells, neuron for Histone ChIP-seq, H3K4me1	Search in vitro differentiated cells, neuron for Histone ChIP-seq, H3K4me3	Search in vitro differentiated cells, neuron for Histone ChIP-seq, H3K36me3	Search in vitro differentiated cells, neuron for Histone ChIP-seq, H3K9me3	Search in vitro differentiated cells, neuron for Histone ChIP-seq, H3K27me3	Search in vitro differentiated cells, neuron for Histone ChIP-seq, H2AFZ
mid-neurogenesis radial glial cells Biosample	Search in vitro differentiated cells, mid-neurogenesis radial glial cells for Histone ChIP-seq, H3K4me1	Search in vitro differentiated cells, mid-neurogenesis radial glial cells for Histone ChIP-seq, H3K4me3		Search in vitro differentiated cells, mid-neurogenesis radial glial cells for Histone ChIP-seq, H3K9me3	Search in vitro differentiated cells, mid-neurogenesis radial glial cells for Histone ChIP-seq, H3K27me3
neuroepithelial stem cell Biosample	Search in vitro differentiated cells, neuroepithelial stem cell for Histone ChIP-seq, H3K4me1	Search in vitro differentiated cells, neuroepithelial stem cell for Histone ChIP-seq, H3K4me3	Search in vitro differentiated cells, neuroepithelial stem cell for Histone ChIP-seq, H3K36me3				Search in vitro differentiated cells, neuroepithelial stem cell for Histone ChIP-seq, H3K27ac
radial glial cell Biosample	Search in vitro differentiated cells, radial glial cell for Histone ChIP-seq, H3K4me1	Search in vitro differentiated cells, radial glial cell for Histone ChIP-seq, H3K4me3	Search in vitro differentiated cells, radial glial cell for Histone ChIP-seq, H3K36me3	Search in vitro differentiated cells, radial glial cell for Histone ChIP-seq, H3K9me3
ecto neural progenitor cell Biosample																	Search in vitro differentiated cells, ecto neural progenitor cell for DNase-seq
islet precursor cell Biosample																	Search in vitro differentiated cells, islet precursor cell for DNase-seq
lateral mesodermal cell Biosample																				Search in vitro differentiated cells, lateral mesodermal cell for Repli-chip
mesenchymal stem cell Biosample																				Search in vitro differentiated cells, mesenchymal stem cell for Repli-chip
mesothelial cell Biosample																				Search in vitro differentiated cells, mesothelial cell for Repli-chip
splanchnic mesodermal cell Biosample																				Search in vitro differentiated cells, splanchnic mesodermal cell for Repli-chip