TopHat
- Status
- released
- Title
- TopHat
- Description
- Fast splice junction mapper for RNA-Seq reads. It aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read aligner Bowtie, and then analyzes the mapping results to identify splice junctions between exons.
- Software type
- aligner
- Used for
- RNA-seq, ChIP-seq