Irreproducible Discovery Rate (IDR)

  • Status: released
Measures consistency between replicates in high-throughput experiments. Also uses reproducibility in score rankings between peaks in each replicate to determine an optimal cutoff for significance. The core IDR R package can be downloaded from the IDR download page:
Software type
quality metric, filtering
Used for
data QC, ChIP-seq, DNase-seq, RNA-seq

Software Versions

VersionDownload checksum
October 2010
Kevin White lab modified, August 2015