Irreproducible Discovery Rate (IDR)
- Status
- released
- Description
- Measures consistency between replicates in high-throughput experiments. Also uses reproducibility in score rankings between peaks in each replicate to determine an optimal cutoff for significance. The core IDR R package can be downloaded from the IDR download page: http://cran.r-project.org/web/packages/idr/index.html
- Software type
- quality metric, filtering
- Used for
- data QC, ChIP-seq, DNase-seq, RNA-seq
- Publications
Software versions
Version | Download checksum |
---|---|
2.0.0 | 3b8d781596f475044a484d0e46e8b4bb44c44712 |
October 2010 | |
Kevin White lab modified, August 2015 | |
2.0.2 | |
2.0.4.2 | 3e827d17b8aedcf9dfcd3039eec688dd |