BWA

Status
released
Title
BWA
Description
BWA is a software package for mapping low-divergent sequences based on a Burrows-Wheeler index against a large reference genome, such as the human genome. Publications for the short read alignment component is found at PMID: 19451168, while PMID: 20080505 outlines the algorithm to align sequences >200bp up to 1Mb.
Software type
aligner
Used for
DNase-seq, ChIP-seq

Software versions

Version
Download checksum
0.7.10
0.7.8cb63f7865b4b043c11ecf5082724d52576ee784e
0.7.12-r1039075704634146ec8cc7543c0dee8960e7
0.7.3a-r367e540086a014b2e0af38d0d6995d9d765
0.7.13f094f609438511766c434178a3635ab4
0.7.12e24a587baaad411d5da89516ad7a261a
0.7.5275b2dde1e65433d001ac22c1e3ce810
0.7.17
0.7.70fa74b1debe42a12c2d8443dfc64ce6c