• Functional Genomics data
    • Experiment search
    • Experiment matrix
    • ChIP-seq matrix
    • Human and mouse body maps
    • Functional genomics series
    • Single-cell experiments
    • Functional Characterization data
    • Experiment search
    • Experiment matrix
    • Cloud Resources
    • AWS Open Data
    • Azure Open Datasets
    • Collections
    • RNA-protein interactions (ENCORE)
    • Epigenomes from four individuals (ENTEx)
    • Rush Alzheimer’s disease study
    • Stem cell differentiation
    • Deeply profiled cell lines
    • Human donor matrix
    • Immune cells
    • Human reference epigenomes
    • Mouse reference epigenomes
    • Mouse development matrix
    • Protein knockdown (Degron)
    • Search by region
    • Publications
    • RNA-Get (gene expression)
    • About
    • Visualize (SCREEN)
    • Encyclopedia browser
    • Search
    • Methods
    • Antibodies
    • Genome references
    • Assays and standards
    • Glossary
    • File formats
    • Software tools
    • Pipelines
    • Data organization
    • Release policy
    • Schemas
    • Using the portal
    • Cart
    • REST API
    • Citing ENCODE
    • FAQ
    • Project Overview
    • Collaborations
    • ENCODE workshops
    • About the DCC
    • Listed carts
  1. Software

bioraddbg ATAC-seq MACS2

Status
released
Title
bioraddbg ATAC-seq MACS2
Description
This Docker container provides an easy to use Docker interface to MACS2 for peak calling with settings tailored for Bio-Rad Single Cell ATAC-seq chemistry.

Software versions

Version
Download checksum
1.0.0
  • Citing ENCODE
  • Privacy
  • Contact
  • Sign in / Create account
  • ENCODE
  • Stanford University
  • Creative Commons

©2024 Stanford University