Summary for ENCSR970ENS
doi:10.17989/ENCSR970ENS
Summary
- Status
- released
- Description
- REMC Epigenome (Class 2) for Primary Hematopoietic Stem Cells G-CSF-mobilized Female using donors/samples:RO_01480; RO_01508; RO_01536; RO_01549; UW_RO_01480
- Donor diversity
- composite
- Assay
- polyA plus RNA-seq, ChIP-seq, whole-genome shotgun bisulfite sequencing, transcription profiling by array assay, DNase-seq, RRBS
- Target
- H3K4me1, H3K27ac, H3K36me3, H3K27me3, H3K9me3, H3K4me3
- Biosample summary
- common myeloid progenitor, CD34-positive primary cell
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E050
- External resources
- Tags
Experiments in ENCSR970ENS
Experiments
28 experiments
Accession | Assay | Target | Donors | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|---|
| ENCSR466AGC | transcription profiling by array assay | ENCDO707VTH, ENCDO410ZKA | Homo sapiens common myeloid progenitor, CD34-positive female adult (27 years) | John Stamatoyannopoulos, UW | archived | ||
| ENCSR353ZGY | transcription profiling by array assay | ENCDO441UHQ | Homo sapiens common myeloid progenitor, CD34-positive male adult (36 years) | John Stamatoyannopoulos, UW | archived | ||
| ENCSR287CTK | transcription profiling by array assay | ENCDO412QUR | Homo sapiens common myeloid progenitor, CD34-positive female adult (33 years) | John Stamatoyannopoulos, UW | archived | ||
| ENCSR672EWT | RRBS | ENCDO707VTH, ENCDO410ZKA | Homo sapiens common myeloid progenitor, CD34-positive female adult (27 years) | Bradley Bernstein, Broad | archived | ||
| ENCSR328NJP | RRBS | ENCDO441UHQ | Homo sapiens common myeloid progenitor, CD34-positive male adult (36 years) | Bradley Bernstein, Broad | archived | ||
| ENCSR600IBJ | RRBS | ENCDO412QUR | Homo sapiens common myeloid progenitor, CD34-positive female adult (33 years) | Bradley Bernstein, Broad | archived | ||
| ENCSR830HIN | polyA plus RNA-seq | ENCDO412QUR | Homo sapiens common myeloid progenitor, CD34-positive female adult (33 years) | John Stamatoyannopoulos, UW | released | ||
| ENCSR388RMS | whole-genome shotgun bisulfite sequencing | ENCDO412QUR | Homo sapiens common myeloid progenitor, CD34-positive female adult (33 years) | Bradley Bernstein, Broad | released | ||
| ENCSR957WQX | ChIP-seq | H3K9me3 | ENCDO412QUR | Homo sapiens common myeloid progenitor, CD34-positive female adult (33 years) | Bradley Bernstein, Broad | released | |
| ENCSR011QFP | ChIP-seq | H3K27me3 | ENCDO441UHQ | Homo sapiens common myeloid progenitor, CD34-positive male adult (36 years) | Bradley Bernstein, Broad | released | |
| ENCSR401CJA | ChIP-seq | H3K4me1 | ENCDO412QUR | Homo sapiens common myeloid progenitor, CD34-positive female adult (33 years) | Bradley Bernstein, Broad | released | |
| ENCSR179MIQ | ChIP-seq | H3K9me3 | ENCDO441UHQ | Homo sapiens common myeloid progenitor, CD34-positive male adult (36 years) | Bradley Bernstein, Broad | released | |
| ENCSR268JEO | ChIP-seq | H3K36me3 | ENCDO441UHQ | Homo sapiens common myeloid progenitor, CD34-positive male adult (36 years) | Bradley Bernstein, Broad | released | |
| ENCSR355PUX | ChIP-seq | H3K27me3 | ENCDO412QUR | Homo sapiens common myeloid progenitor, CD34-positive female adult (33 years) | Bradley Bernstein, Broad | released | |
| ENCSR891KSP | ChIP-seq | H3K27ac | ENCDO707VTH, ENCDO410ZKA | Homo sapiens common myeloid progenitor, CD34-positive female adult (27 years) | Bradley Bernstein, Broad | released | |
| ENCSR438DSO | ChIP-seq | H3K4me3 | ENCDO441UHQ | Homo sapiens common myeloid progenitor, CD34-positive male adult (36 years) | Bradley Bernstein, Broad | released | |
| ENCSR453EVC | DNase-seq | ENCDO441UHQ | Homo sapiens common myeloid progenitor, CD34-positive male adult (36 years) | John Stamatoyannopoulos, UW | released | ||
| ENCSR731OMG | ChIP-seq | H3K36me3 | ENCDO707VTH, ENCDO410ZKA | Homo sapiens common myeloid progenitor, CD34-positive female adult (27 years) | Bradley Bernstein, Broad | released | |
| ENCSR196KYU | ChIP-seq | H3K4me1 | ENCDO441UHQ | Homo sapiens common myeloid progenitor, CD34-positive male adult (36 years) | Bradley Bernstein, Broad | released | |
| ENCSR862NIZ | ChIP-seq | H3K27me3 | ENCDO707VTH, ENCDO410ZKA | Homo sapiens common myeloid progenitor, CD34-positive female adult (27 years) | Bradley Bernstein, Broad | released | |
| ENCSR468ZXN | DNase-seq | ENCDO412QUR | Homo sapiens common myeloid progenitor, CD34-positive female adult (33 years) | John Stamatoyannopoulos, UW | released | ||
| ENCSR122VUW | DNase-seq | ENCDO707VTH, ENCDO410ZKA | Homo sapiens common myeloid progenitor, CD34-positive female adult (27 years) | John Stamatoyannopoulos, UW | released | ||
| ENCSR620AZM | ChIP-seq | H3K27ac | ENCDO412QUR | Homo sapiens common myeloid progenitor, CD34-positive female adult (33 years) | Bradley Bernstein, Broad | released | |
| ENCSR340SGE | ChIP-seq | H3K4me1 | ENCDO410ZKA, ENCDO707VTH | Homo sapiens common myeloid progenitor, CD34-positive female adult (27 years) | Bradley Bernstein, Broad | released | |
| ENCSR681HMF | ChIP-seq | H3K4me3 | ENCDO707VTH, ENCDO410ZKA | Homo sapiens common myeloid progenitor, CD34-positive female adult (27 years) | Bradley Bernstein, Broad | released |
Control experiments
3 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR714CKG | input library | Homo sapiens common myeloid progenitor, CD34-positive female adult (33 years) | Bradley Bernstein, Broad | released | |
| ENCSR612PJQ | input library | Homo sapiens common myeloid progenitor, CD34-positive male adult (36 years) | Bradley Bernstein, Broad | released | |
| ENCSR707TMM | input library | Homo sapiens common myeloid progenitor, CD34-positive female adult (27 years) | Bradley Bernstein, Broad | released |