Summary for ENCSR908HXO
doi:10.17989/ENCSR908HXO
Summary
- Status
- released
- Description
- Reference epigenome for human Peyer's patch (37 year old male)
- Donor diversity
- single
- Assay
- RNA-seq, DNase-seq, ChIP-seq
- Target
- H3K27me3, H3K4me1, H3K27ac, H3K36me3, CTCF, H3K9me3, H3K4me3
- Biosample summary
- Homo sapiens Peyer's patch tissue male adult (37 years)
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- ENCODE Consortium
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- External resources
Experiments in ENCSR908HXO
Experiments
9 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|
| ENCSR063BPD | ChIP-seq | H3K36me3 | Homo sapiens Peyer's patch tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR349GPJ | ChIP-seq | H3K4me3 | Homo sapiens Peyer's patch tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR416ZMW | ChIP-seq | H3K4me1 | Homo sapiens Peyer's patch tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR419ANE | ChIP-seq | CTCF | Homo sapiens Peyer's patch tissue male adult (37 years) | Michael Snyder, Stanford | released | |
| ENCSR440PMP | ChIP-seq | H3K27ac | Homo sapiens Peyer's patch tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR632SLJ | ChIP-seq | H3K27me3 | Homo sapiens Peyer's patch tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR667SCY | ChIP-seq | H3K9me3 | Homo sapiens Peyer's patch tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR802HPM | RNA-seq | Homo sapiens Peyer's patch tissue male adult (37 years) | Thomas Gingeras, CSHL | released | ||
| ENCSR954AJK | DNase-seq | Homo sapiens Peyer's patch tissue male adult (37 years) | John Stamatoyannopoulos, UW | released |
Control experiments
2 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR708OCZ | input library | Homo sapiens Peyer's patch tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR067AZA | input library | Homo sapiens Peyer's patch tissue male adult (37 years) | Michael Snyder, Stanford | released |