Summary for ENCSR881FTZ
doi:10.17989/ENCSR881FTZ
Summary
- Status
- released
- Description
- Reference epigenome for human breast epithelium (51 year old female)
- Donor diversity
- single
- Assay
- ChIP-seq, RNA-seq, DNase-seq, ATAC-seq
- Target
- POLR2AphosphoS5, H3K4me1, H3K27ac, H3K36me3, H3K27me3, H3K9me3, POLR2A, H3K4me3, CTCF
- Biosample summary
- Homo sapiens breast epithelium tissue female adult (51 years)
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- ENCODE Consortium
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- External resources
Experiments in ENCSR881FTZ
Experiments
12 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|
| ENCSR081OTO | ChIP-seq | H3K27ac | Homo sapiens breast epithelium tissue female adult (51 years) | Bradley Bernstein, Broad | released | |
| ENCSR134LLK | ChIP-seq | H3K27me3 | Homo sapiens breast epithelium tissue female adult (51 years) | Bradley Bernstein, Broad | released | |
| ENCSR263XKR | ChIP-seq | H3K4me1 | Homo sapiens breast epithelium tissue female adult (51 years) | Bradley Bernstein, Broad | released | |
| ENCSR304IVU | ChIP-seq | POLR2A | Homo sapiens breast epithelium tissue female adult (51 years) | Michael Snyder, Stanford | released | |
| ENCSR400WEK | ChIP-seq | POLR2AphosphoS5 | Homo sapiens breast epithelium tissue female adult (51 years) | Richard Myers, HAIB | released | |
| ENCSR438YPF | RNA-seq | Homo sapiens breast epithelium tissue female adult (51 years) | Thomas Gingeras, CSHL | released | ||
| ENCSR568QQU | ChIP-seq | H3K4me3 | Homo sapiens breast epithelium tissue female adult (51 years) | Bradley Bernstein, Broad | released | |
| ENCSR661NXJ | ChIP-seq | CTCF | Homo sapiens breast epithelium tissue female adult (51 years) | Michael Snyder, Stanford | released | |
| ENCSR793QCL | ChIP-seq | H3K36me3 | Homo sapiens breast epithelium tissue female adult (51 years) | Bradley Bernstein, Broad | released | |
| ENCSR846ZBX | ATAC-seq | Homo sapiens breast epithelium tissue female adult (51 years) | Michael Snyder, Stanford | released | ||
| ENCSR859LTL | DNase-seq | Homo sapiens breast epithelium tissue female adult (51 years) | John Stamatoyannopoulos, UW | released | ||
| ENCSR936LAH | ChIP-seq | H3K9me3 | Homo sapiens breast epithelium tissue female adult (51 years) | Bradley Bernstein, Broad | released |
Control experiments
3 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR980TBV | input library | Homo sapiens breast epithelium tissue female adult (51 years) | Bradley Bernstein, Broad | released | |
| ENCSR794WXG | input library | Homo sapiens breast epithelium tissue female adult (51 years) | Michael Snyder, Stanford | released | |
| ENCSR237CQV | input library | Homo sapiens breast epithelium tissue female adult (51 years) | Richard Myers, HAIB | released |