Summary for ENCSR856EKB
doi:10.17989/ENCSR856EKB
Summary
- Status
- released
- Description
- REMC Epigenome (Class 3) for Foreskin Fibroblast Primary Cells using donors/samples:skin01
- Donor diversity
- single
- Assay
- ChIP-seq, polyA plus RNA-seq, microRNA-seq, MRE-seq, DNase-seq, MeDIP-seq
- Target
- H3K4me1, H3K27ac, H3K36me3, H3K27me3, H3K9me3, H3K4me3, Methylcytidine
- Biosample summary
- Homo sapiens foreskin fibroblast male newborn
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E055
- External resources
Experiments in ENCSR856EKB
Experiments
11 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|
| ENCSR512BHQ | ChIP-seq | H3K9me3 | Homo sapiens foreskin fibroblast male newborn | Joseph Costello, UCSF | released | |
| ENCSR285UTJ | ChIP-seq | H3K27me3 | Homo sapiens foreskin fibroblast male newborn | Joseph Costello, UCSF | released | |
| ENCSR118GUR | microRNA-seq | Homo sapiens foreskin fibroblast male newborn | Joseph Costello, UCSF | released | ||
| ENCSR346DNL | ChIP-seq | H3K4me1 | Homo sapiens foreskin fibroblast male newborn | Joseph Costello, UCSF | released | |
| ENCSR555LFY | polyA plus RNA-seq | Homo sapiens foreskin fibroblast male newborn | Joseph Costello, UCSF | archived | ||
| ENCSR889OUV | ChIP-seq | H3K36me3 | Homo sapiens foreskin fibroblast male newborn | Joseph Costello, UCSF | released | |
| ENCSR153LHP | DNase-seq | Homo sapiens foreskin fibroblast male newborn | John Stamatoyannopoulos, UW | released | ||
| ENCSR130JMB | MRE-seq | Homo sapiens foreskin fibroblast male newborn | Joseph Costello, UCSF | archived | ||
| ENCSR108NVQ | ChIP-seq | H3K27ac | Homo sapiens foreskin fibroblast male newborn | Joseph Costello, UCSF | released | |
| ENCSR066VGI | MeDIP-seq | Methylcytidine | Homo sapiens foreskin fibroblast male newborn | Joseph Costello, UCSF | archived | |
| ENCSR079ZQI | ChIP-seq | H3K4me3 | Homo sapiens foreskin fibroblast male newborn | Joseph Costello, UCSF | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR214UPJ | input library | Homo sapiens foreskin fibroblast male newborn | Joseph Costello, UCSF | released |