Summary for ENCSR853SDI
doi:10.17989/ENCSR853SDI
Summary
- Status
- released
- Description
- Reference epigenome for human tibial nerve (37 year old male)
- Donor diversity
- single
- Assay
- ChIP-seq, RNA-seq, DNase-seq, small RNA-seq
- Target
- H3K4me1, H3K27ac, H3K36me3, H3K9me3, H3K27me3, EP300, H3K4me3, CTCF
- Biosample summary
- Homo sapiens tibial nerve tissue male adult (37 years)
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- ENCODE Consortium
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- External resources
Experiments in ENCSR853SDI
Experiments
11 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|
| ENCSR203DPX | small RNA-seq | Homo sapiens tibial nerve tissue male adult (37 years) | Thomas Gingeras, CSHL | released | ||
| ENCSR245VRR | ChIP-seq | H3K36me3 | Homo sapiens tibial nerve tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR384MUF | ChIP-seq | H3K4me3 | Homo sapiens tibial nerve tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR434XLP | ChIP-seq | CTCF | Homo sapiens tibial nerve tissue male adult (37 years) | Michael Snyder, Stanford | released | |
| ENCSR484UAU | DNase-seq | Homo sapiens tibial nerve tissue male adult (37 years) | John Stamatoyannopoulos, UW | released | ||
| ENCSR516LQO | ChIP-seq | H3K27ac | Homo sapiens tibial nerve tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR580XUK | ChIP-seq | EP300 | Homo sapiens tibial nerve tissue male adult (37 years) | Richard Myers, HAIB | released | |
| ENCSR639JPM | ChIP-seq | H3K9me3 | Homo sapiens tibial nerve tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR796HLX | RNA-seq | Homo sapiens tibial nerve tissue male adult (37 years) | Thomas Gingeras, CSHL | released | ||
| ENCSR860ZCZ | ChIP-seq | H3K27me3 | Homo sapiens tibial nerve tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR981CTV | ChIP-seq | H3K4me1 | Homo sapiens tibial nerve tissue male adult (37 years) | Bradley Bernstein, Broad | released |
Control experiments
3 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR329HFV | input library | Homo sapiens tibial nerve tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR004FGW | input library | Homo sapiens tibial nerve tissue male adult (37 years) | Michael Snyder, Stanford | released | |
| ENCSR846VRM | input library | Homo sapiens tibial nerve tissue male adult (37 years) | Richard Myers, HAIB | released |