Summary for ENCSR752LMU
doi:10.17989/ENCSR752LMU
Summary
- Status
- released
- Description
- REMC Epigenome (Class 2) for Sigmoid Colon using donors/samples:STL001;STL003
- Donor diversity
- composite
- Assay
- polyA plus RNA-seq, ChIP-seq, whole-genome shotgun bisulfite sequencing
- Target
- H3K4me1, H3K27ac, H3K36me3, H3K9me3, H3K27me3, H3K4me3
- Biosample summary
- sigmoid colon tissue
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E106
- External resources
- Tags
Experiments in ENCSR752LMU
Experiments
15 experiments
Accession | Assay | Target | Donors | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|---|
| ENCSR999ZCI | polyA plus RNA-seq | ENCDO058AAA | Homo sapiens sigmoid colon tissue male adult (34 years) | Joe Ecker, Salk | released | ||
| ENCSR396GIH | polyA plus RNA-seq | ENCDO478OMA | Homo sapiens sigmoid colon tissue male child (3 years) | Joe Ecker, Salk | released | ||
| ENCSR331PWE | whole-genome shotgun bisulfite sequencing | ENCDO058AAA | Homo sapiens sigmoid colon tissue male adult (34 years) | Joe Ecker, Salk | released | ||
| ENCSR987GWQ | whole-genome shotgun bisulfite sequencing | ENCDO478OMA | Homo sapiens sigmoid colon tissue male child (3 years) | Joe Ecker, Salk | released | ||
| ENCSR042RIW | ChIP-seq | H3K27me3 | ENCDO058AAA | Homo sapiens sigmoid colon tissue male adult (34 years) | Bing Ren, UCSD | released | |
| ENCSR445RFF | ChIP-seq | H3K36me3 | ENCDO058AAA | Homo sapiens sigmoid colon tissue male adult (34 years) | Bing Ren, UCSD | released | |
| ENCSR213SMK | ChIP-seq | H3K27ac | ENCDO478OMA | Homo sapiens sigmoid colon tissue male child (3 years) | Bing Ren, UCSD | released | |
| ENCSR897TGR | ChIP-seq | H3K27me3 | ENCDO478OMA | Homo sapiens sigmoid colon tissue male child (3 years) | Bing Ren, UCSD | released | |
| ENCSR737NLJ | ChIP-seq | H3K9me3 | ENCDO058AAA | Homo sapiens sigmoid colon tissue male adult (34 years) | Bing Ren, UCSD | released | |
| ENCSR636IDR | ChIP-seq | H3K9me3 | ENCDO478OMA | Homo sapiens sigmoid colon tissue male child (3 years) | Bing Ren, UCSD | released | |
| ENCSR751JOQ | ChIP-seq | H3K36me3 | ENCDO478OMA | Homo sapiens sigmoid colon tissue male child (3 years) | Bing Ren, UCSD | released | |
| ENCSR782OZZ | ChIP-seq | H3K4me1 | ENCDO058AAA | Homo sapiens sigmoid colon tissue male adult (34 years) | Bing Ren, UCSD | released | |
| ENCSR561YSH | ChIP-seq | H3K27ac | ENCDO058AAA | Homo sapiens sigmoid colon tissue male adult (34 years) | Bing Ren, UCSD | released | |
| ENCSR504SKC | ChIP-seq | H3K4me1 | ENCDO478OMA | Homo sapiens sigmoid colon tissue male child (3 years) | Bing Ren, UCSD | released | |
| ENCSR321SZE | ChIP-seq | H3K4me3 | ENCDO478OMA | Homo sapiens sigmoid colon tissue male child (3 years) | Bing Ren, UCSD | released |
Control experiments
2 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR574WQE | input library | Homo sapiens sigmoid colon tissue male adult (34 years) | Bing Ren, UCSD | released | |
| ENCSR780UWK | input library | Homo sapiens sigmoid colon tissue male child (3 years) | Bing Ren, UCSD | released |