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Summary for ENCSR589ATA

doi:10.17989/ENCSR589ATA

Summary

Status
released
Description
REMC Epigenome (Class 2) for iPS DF 19.11 Cells using donors/samples:iPS-19.11-01; iPS-19.11-02
Donor diversity
single
Assay
ChIP-seq, DNase-seq, transcription profiling by array assay, whole-genome shotgun bisulfite sequencing
Target
H3K4me1, H3K27ac, H3K36me3, H3K27me3, H3K9me3, H3K4me3
Biosample summary
Homo sapiens iPS DF 19.11
Diseases
Not reported

Attribution

Roadmap Epigenomics Mapping Consortium
Lab
Anshul Kundaje, Stanford
Award
U01DA025956 (Roadmap Epigenomics, Baylor)
Project
Roadmap
Aliases
roadmap-epigenomics:E022
External resources
Tags
Search for all ReferenceEpigenome with internal tag ccre_inputv1

Experiments in ENCSR589ATA

Experiments
9 experiments
Accession
Assay
Target
Biosample summary
Lab
Status
Cart
ENCSR307OAJChIP-seqH3K4me1Homo sapiens iPS DF 19.11Bing Ren, UCSD
released
ENCSR561YHAwhole-genome shotgun bisulfite sequencingHomo sapiens iPS DF 19.11Joe Ecker, Salk
released
ENCSR704BRUChIP-seqH3K9me3Homo sapiens iPS DF 19.11Bing Ren, UCSD
released
ENCSR383SNMDNase-seqHomo sapiens iPS DF 19.11John Stamatoyannopoulos, UW
released
ENCSR100PNVChIP-seqH3K27me3Homo sapiens iPS DF 19.11Bing Ren, UCSD
released
ENCSR432CBFtranscription profiling by array assayHomo sapiens iPS DF 19.11John Stamatoyannopoulos, UW
archived
ENCSR888WZLChIP-seqH3K4me3Homo sapiens iPS DF 19.11Bing Ren, UCSD
released
ENCSR505OPZChIP-seqH3K27acHomo sapiens iPS DF 19.11Bing Ren, UCSD
released
ENCSR067BNIChIP-seqH3K36me3Homo sapiens iPS DF 19.11Bing Ren, UCSD
released
Control experiments
2 control experiments
Accession
Control type
Biosample summary
Lab
Status
Cart
ENCSR086NVHinput libraryHomo sapiens iPS DF 19.11Bing Ren, UCSD
released
ENCSR680APMinput libraryHomo sapiens iPS DF 19.11Bing Ren, UCSD
released

Files

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Output type
Replicates

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