Summary for ENCSR527XKV
doi:10.17989/ENCSR527XKV
Summary
- Status
- released
- Description
- Reference epigenome for human esophagus muscularis mucosa (51 year old female)
- Donor diversity
- single
- Assay
- RNA-seq, small RNA-seq, whole-genome shotgun bisulfite sequencing, ChIP-seq
- Target
- H3K27me3, H3K4me1, POLR2AphosphoS5, H3K27ac, H3K36me3, CTCF, H3K9me3, H3K4me3
- Biosample summary
- Homo sapiens esophagus muscularis mucosa tissue female adult (51 years)
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- ENCODE Consortium
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- External resources
- Tags
Experiments in ENCSR527XKV
Experiments
11 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|
| ENCSR200AFX | ChIP-seq | H3K27me3 | Homo sapiens esophagus muscularis mucosa tissue female adult (51 years) | Bradley Bernstein, Broad | released | |
| ENCSR295NAK | small RNA-seq | Homo sapiens esophagus muscularis mucosa tissue female adult (51 years) | Thomas Gingeras, CSHL | released | ||
| ENCSR403PEI | ChIP-seq | H3K4me3 | Homo sapiens esophagus muscularis mucosa tissue female adult (51 years) | Bradley Bernstein, Broad | released | |
| ENCSR442ZTI | ChIP-seq | POLR2AphosphoS5 | Homo sapiens esophagus muscularis mucosa tissue female adult (51 years) | Richard Myers, HAIB | released | |
| ENCSR443WKD | ChIP-seq | CTCF | Homo sapiens esophagus muscularis mucosa tissue female adult (51 years) | Bradley Bernstein, Broad | released | |
| ENCSR620LQN | RNA-seq | Homo sapiens esophagus muscularis mucosa tissue female adult (51 years) | Thomas Gingeras, CSHL | released | ||
| ENCSR701GIE | ChIP-seq | H3K4me1 | Homo sapiens esophagus muscularis mucosa tissue female adult (51 years) | Bradley Bernstein, Broad | released | |
| ENCSR708BMV | ChIP-seq | H3K9me3 | Homo sapiens esophagus muscularis mucosa tissue female adult (51 years) | Bradley Bernstein, Broad | released | |
| ENCSR845BEG | ChIP-seq | H3K36me3 | Homo sapiens esophagus muscularis mucosa tissue female adult (51 years) | Bradley Bernstein, Broad | released | |
| ENCSR882FJT | whole-genome shotgun bisulfite sequencing | Homo sapiens esophagus muscularis mucosa tissue female adult (51 years) | Richard Myers, HAIB | released | ||
| ENCSR894MOX | ChIP-seq | H3K27ac | Homo sapiens esophagus muscularis mucosa tissue female adult (51 years) | Bradley Bernstein, Broad | released |
Control experiments
2 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR545WFH | input library | Homo sapiens esophagus muscularis mucosa tissue female adult (51 years) | Bradley Bernstein, Broad | released | |
| ENCSR089MPD | input library | Homo sapiens esophagus muscularis mucosa tissue female adult (51 years) | Richard Myers, HAIB | released |